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CATSPERD cation channel sperm associated auxiliary subunit delta [ Bos taurus (domestic cattle) ]

Gene ID: 617472, updated on 17-Aug-2024

Summary

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Official Symbol
CATSPERDprovided by VGNC
Official Full Name
cation channel sperm associated auxiliary subunit deltaprovided by VGNC
Primary source
VGNC:VGNC:26797
See related
BGD:BT16519; Ensembl:ENSBTAG00000001796
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
TMEM146
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
26
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (18552688..18590378, complement)

Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA U2-19 Neighboring gene small nucleolar RNA U2-30 Neighboring gene lon peptidase 1, mitochondrial Neighboring gene ribosomal protein L36 Neighboring gene hydroxysteroid 11-beta dehydrogenase 1 like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in flagellated sperm motility IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sperm capacitation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CatSper complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in sperm principal piece IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cation channel sperm-associated auxiliary subunit delta
Names
catSper-delta
catSperdelta
cation channel sperm-associated protein subunit delta
transmembrane protein 146

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    18552688..18590378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015472063.3 → XP_015327549.2  cation channel sperm-associated auxiliary subunit delta isoform X6

    UniProtKB/TrEMBL
    A0A452DHU9
    Related
    ENSBTAP00000002352.5, ENSBTAT00000002352.6
    Conserved Domains (1) summary
    pfam15020
    Location:54 → 782
    CATSPERD; Cation channel sperm-associated protein subunit delta

  2. XM_024994967.2 → XP_024850735.1  cation channel sperm-associated auxiliary subunit delta isoform X7

    Conserved Domains (1) summary
    pfam15020
    Location:34 → 590
    CATSPERD; Cation channel sperm-associated protein subunit delta

  3. XM_024994965.2 → XP_024850733.1  cation channel sperm-associated auxiliary subunit delta isoform X2

    Conserved Domains (1) summary
    pfam15020
    Location:32 → 640
    CATSPERD; Cation channel sperm-associated protein subunit delta

  4. XM_059888640.1 → XP_059744623.1  cation channel sperm-associated auxiliary subunit delta isoform X9

  5. XM_059888636.1 → XP_059744619.1  cation channel sperm-associated auxiliary subunit delta isoform X3

  6. XM_059888638.1 → XP_059744621.1  cation channel sperm-associated auxiliary subunit delta isoform X5

  7. XM_059888637.1 → XP_059744620.1  cation channel sperm-associated auxiliary subunit delta isoform X4

  8. XM_059888635.1 → XP_059744618.1  cation channel sperm-associated auxiliary subunit delta isoform X1

  9. XM_059888641.1 → XP_059744624.1  cation channel sperm-associated auxiliary subunit delta isoform X9

  10. XM_059888639.1 → XP_059744622.1  cation channel sperm-associated auxiliary subunit delta isoform X8

    UniProtKB/TrEMBL
    A0A452DHU9

  11. XM_059888642.1 → XP_059744625.1  cation channel sperm-associated auxiliary subunit delta isoform X10

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
E1B9E5.1 GenPept UniProtKB/Swiss-Prot:E1B9E5

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