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MSI1 musashi RNA binding protein 1 [ Canis lupus familiaris (dog) ]

Gene ID: 611488, updated on 5-Mar-2024

Summary

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Official Symbol
MSI1provided by VGNC
Official Full Name
musashi RNA binding protein 1provided by VGNC
Primary source
VGNC:VGNC:43442
See related
Ensembl:ENSCAFG00845029732
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See MSI1 in Genome Data Viewer
Location:
chromosome: 26
Exon count:
16
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 26 NC_051830.1 (16533308..16556005, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 26 NC_006608.4 (16270168..16292838, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 26 NC_049247.1 (16614085..16635848, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 26 NC_049286.1 (16494719..16517389, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 26 NC_049767.1 (16571374..16594034, complement)

Chromosome 26 - NC_051830.1Genomic Context describing neighboring genes Neighboring gene sirtuin 4 Neighboring gene uncharacterized LOC119866173 Neighboring gene phospholipase A2 group IB Neighboring gene uncharacterized LOC119866175 Neighboring gene uncharacterized LOC102156443 Neighboring gene uncharacterized LOC111092565

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
RNA-binding protein Musashi homolog 1
Names
musashi homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051830.1 Reference ROS_Cfam_1.0

    Range
    16533308..16556005 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038436926.1 → XP_038292854.1  RNA-binding protein Musashi homolog 1 isoform X4

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 329
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  2. XM_038436925.1 → XP_038292853.1  RNA-binding protein Musashi homolog 1 isoform X3

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 320
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  3. XM_038436924.1 → XP_038292852.1  RNA-binding protein Musashi homolog 1 isoform X2

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 328
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  4. XM_038436922.1 → XP_038292850.1  RNA-binding protein Musashi homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P9B2, A0A8I3Q293
    Related
    ENSCAFP00845041320.1, ENSCAFT00845052649.1
    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 339
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  5. XM_038436923.1 → XP_038292851.1  RNA-binding protein Musashi homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P9B2, A0A8I3Q293
    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 339
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049286.1 Alternate UMICH_Zoey_3.1

    Range
    16494719..16517389 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038511818.1 → XP_038367746.1  RNA-binding protein Musashi homolog 1 isoform X4

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 329
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  2. XM_038511817.1 → XP_038367745.1  RNA-binding protein Musashi homolog 1 isoform X3

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 320
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  3. XM_038511816.1 → XP_038367744.1  RNA-binding protein Musashi homolog 1 isoform X2

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 328
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  4. XM_038511814.1 → XP_038367742.1  RNA-binding protein Musashi homolog 1 isoform X1

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 339
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  5. XM_038511815.1 → XP_038367743.1  RNA-binding protein Musashi homolog 1 isoform X1

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 339
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049767.1 Alternate UNSW_CanFamBas_1.0

    Range
    16571374..16594034 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038639504.1 → XP_038495432.1  RNA-binding protein Musashi homolog 1 isoform X4

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 329
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  2. XM_038639503.1 → XP_038495431.1  RNA-binding protein Musashi homolog 1 isoform X3

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 320
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  3. XM_038639502.1 → XP_038495430.1  RNA-binding protein Musashi homolog 1 isoform X2

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 328
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  4. XM_038639500.1 → XP_038495428.1  RNA-binding protein Musashi homolog 1 isoform X1

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 339
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  5. XM_038639501.1 → XP_038495429.1  RNA-binding protein Musashi homolog 1 isoform X1

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 339
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049247.1 Alternate UU_Cfam_GSD_1.0

    Range
    16614085..16635848 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038575317.1 → XP_038431245.1  RNA-binding protein Musashi homolog 1 isoform X4

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 329
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  2. XM_038575316.1 → XP_038431244.1  RNA-binding protein Musashi homolog 1 isoform X3

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 320
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  3. XM_038575315.1 → XP_038431243.1  RNA-binding protein Musashi homolog 1 isoform X2

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 328
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  4. XM_038575312.1 → XP_038431240.1  RNA-binding protein Musashi homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P9B2, A0A8I3Q293
    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 339
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  5. XM_038575313.1 → XP_038431241.1  RNA-binding protein Musashi homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P9B2, A0A8I3Q293
    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 339
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006608.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    16270168..16292838 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005636303.4 → XP_005636360.2  RNA-binding protein Musashi homolog 1 isoform X4

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 329
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  2. XM_014108096.3 → XP_013963571.2  RNA-binding protein Musashi homolog 1 isoform X3

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 320
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  3. XM_005636302.4 → XP_005636359.2  RNA-binding protein Musashi homolog 1 isoform X2

    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 328
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  4. XM_849159.6 → XP_854252.3  RNA-binding protein Musashi homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P9B2, A0A8I3Q293
    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 339
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins

  5. XM_022410439.2 → XP_022266147.2  RNA-binding protein Musashi homolog 1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0P9B2, A0A8I3Q293
    Conserved Domains (3) summary
    TIGR01628
    Location:32 → 339
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12323
    Location:110 → 183
    RRM2_MSI; RNA recognition motif 2 (RRM2) found in RNA-binding protein Musashi homologs Musashi-1, Musashi-2 and similar proteins
    cd12576
    Location:21 → 96
    RRM1_MSI; RNA recognition motif 1 (RRM1) found in RNA-binding protein Musashi homolog Musashi-1, Musashi-2 and similar proteins
Nucleotide Protein
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