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BPIFA2 BPI fold containing family A member 2 [ Canis lupus familiaris (dog) ]

Gene ID: 608599, updated on 5-Mar-2024

Summary

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Official Symbol
BPIFA2provided by VGNC
Official Full Name
BPI fold containing family A member 2provided by VGNC
Primary source
VGNC:VGNC:38505
See related
Ensembl:ENSCAFG00845023488
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See BPIFA2 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
10
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 24 NC_051828.1 (23099011..23109457)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 24 NC_006606.4 (22058860..22069311)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 24 NC_049245.1 (22915724..22926167)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 24 NC_049284.1 (22374559..22385013)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 24 NC_049765.1 (22484616..22495072)

Chromosome 24 - NC_051828.1Genomic Context describing neighboring genes Neighboring gene BPI fold containing family B member 4 Neighboring gene uncharacterized LOC119865653 Neighboring gene BPI fold-containing family B member 4-like Neighboring gene uncharacterized LOC102151319 Neighboring gene BPI fold containing family A member 3 Neighboring gene BPI fold containing family A member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Distant cousins: genomic and sequence diversity within the BPI fold-containing (BPIF)/PLUNC protein family. Bingle CD, et al. Biochem Soc Trans, 2011 Aug. PMID 21787330
  2. Systematic nomenclature for the PLUNC/PSP/BSP30/SMGB proteins as a subfamily of the BPI fold-containing superfamily. Bingle CD, et al. Biochem Soc Trans, 2011 Aug. PMID 21787333, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
BPI fold-containing family A member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051828.1 Reference ROS_Cfam_1.0

    Range
    23099011..23109457
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038433505.1 → XP_038289433.1  BPI fold-containing family A member 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JTG2
    Conserved Domains (1) summary
    cl00188
    Location:100 → 227
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  2. XM_038433506.1 → XP_038289434.1  BPI fold-containing family A member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0QE87, A0A8I3PIK6
    Related
    ENSCAFP00845032514.1, ENSCAFT00845041465.1
    Conserved Domains (1) summary
    cl00188
    Location:100 → 227
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049284.1 Alternate UMICH_Zoey_3.1

    Range
    22374559..22385013
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038508690.1 → XP_038364618.1  BPI fold-containing family A member 2 isoform X1

    Conserved Domains (1) summary
    cl00188
    Location:100 → 227
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  2. XM_038508691.1 → XP_038364619.1  BPI fold-containing family A member 2 isoform X2

    Conserved Domains (1) summary
    cl00188
    Location:100 → 227
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049765.1 Alternate UNSW_CanFamBas_1.0

    Range
    22484616..22495072
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038636255.1 → XP_038492183.1  BPI fold-containing family A member 2 isoform X1

    Conserved Domains (1) summary
    cl00188
    Location:100 → 227
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  2. XM_038636256.1 → XP_038492184.1  BPI fold-containing family A member 2 isoform X2

    Conserved Domains (1) summary
    cl00188
    Location:100 → 227
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049245.1 Alternate UU_Cfam_GSD_1.0

    Range
    22915724..22926167
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038572000.1 → XP_038427928.1  BPI fold-containing family A member 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JTG2
    Conserved Domains (1) summary
    cl00188
    Location:100 → 227
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  2. XM_038572001.1 → XP_038427929.1  BPI fold-containing family A member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0QE87, A0A8I3PIK6
    Conserved Domains (1) summary
    cl00188
    Location:100 → 227
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006606.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    22058860..22069311
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038457711.1 → XP_038313639.1  BPI fold-containing family A member 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0JTG2
    Conserved Domains (1) summary
    cl00188
    Location:100 → 227
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...

  2. XM_038457712.1 → XP_038313640.1  BPI fold-containing family A member 2 isoform X2

    UniProtKB/TrEMBL
    A0A8C0QE87, A0A8I3PIK6
    Conserved Domains (1) summary
    cl00188
    Location:100 → 227
    BPI; BPI/LBP/CETP domain; Bactericidal permeability-increasing protein (BPI) / Lipopolysaccharide-binding protein (LBP) / Cholesteryl ester transfer protein (CETP) domain; binds to and neutralizes lipopolysaccharides from the outer membrane of Gram-negative ...
Nucleotide Protein
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