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Hr3 Hormone receptor 3 [ Culex quinquefasciatus (southern house mosquito) ]

Gene ID: 6049002, updated on 23-May-2024

Summary

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Gene symbol
Hr3
Gene description
Hormone receptor 3
See related
VectorBase:CQUJHB007406; EnsemblRapid:LOC6049002
Gene type
protein coding
RefSeq status
MODEL
Organism
Culex quinquefasciatus
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Diptera; Nematocera; Culicoidea; Culicidae; Culicinae; Culicini; Culex; Culex
Orthologs
fruit fly all
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Genomic context

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See Hr3 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
13
Annotation release Status Assembly Chr Location
100 current VPISU_Cqui_1.0_pri_paternal (GCF_015732765.1) 2 NC_051862.1 (180230423..180585423)

Chromosome 2 - NC_051862.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC6043178 Neighboring gene histidine decarboxylase Neighboring gene uncharacterized LOC119766788 Neighboring gene uncharacterized LOC6048997 Neighboring gene uncharacterized LOC6040713

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_051862.1 Chromosome 2 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable nuclear hormone receptor HR3
Names
nuclear receptor 3
retinoic acid receptor beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Culex quinquefasciatus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

Genomic

  1. NC_051862.1 Reference VPISU_Cqui_1.0_pri_paternal Primary Assembly

    Range
    180230423..180585423
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038251863.1 → XP_038107791.1  probable nuclear hormone receptor HR3 isoform X4

    Related
    XP_038107791.1, XM_038251863.1
    Conserved Domains (2) summary
    cd06968
    Location:3 → 97
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    cl11397
    Location:195 → 437
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

  2. XM_038251862.1 → XP_038107790.1  probable nuclear hormone receptor HR3 isoform X3

    Related
    XP_038107790.1, XM_038251862.1
    Conserved Domains (2) summary
    cd06968
    Location:42 → 136
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    cl11397
    Location:234 → 476
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators

  3. XM_038251860.1 → XP_038107788.1  probable nuclear hormone receptor HR3 isoform X1

    Related
    XP_038107788.1, XM_038251860.1
    Conserved Domains (2) summary
    cd06939
    Location:753 → 995
    NR_LBD_ROR_like; The ligand binding domain of Retinoid-related orphan receptors, of the nuclear receptor superfamily
    cd06968
    Location:348 → 442
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers

  4. XM_038251861.1 → XP_038107789.1  probable nuclear hormone receptor HR3 isoform X2

    Related
    XP_038107789.1, XM_038251861.1
    Conserved Domains (2) summary
    cd06968
    Location:348 → 442
    NR_DBD_ROR; DNA-binding domain of Retinoid-related orphan receptors (RORs) is composed of two C4-type zinc fingers
    cl11397
    Location:540 → 782
    NR_LBD; The ligand binding domain of nuclear receptors, a family of ligand-activated transcription regulators
Nucleotide Protein Strain
Heading Accession and Version

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