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gtpbp1 GTP binding protein 1 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 594925, updated on 17-Aug-2024

Summary

Official Symbol
gtpbp1provided by Xenbase
Official Full Name
GTP binding protein 1provided by Xenbase
Primary source
Xenbase:XB-GENE-951182
See related
Ensembl:ENSXETG00000006894
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
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Genomic context

See gtpbp1 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
13
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (120402593..120425084, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (110006669..110029504, complement)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene PHD finger protein 5A Neighboring gene transducer of ERBB2, 2 Neighboring gene Josephin domain containing 1 Neighboring gene translocase of outer mitochondrial membrane 22 homolog

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001078704.1NP_001072172.1  GTP-binding protein 1

    See identical proteins and their annotated locations for NP_001072172.1

    Status: PROVISIONAL

    Source sequence(s)
    BC121838
    UniProtKB/TrEMBL
    A0A6I8PZI5, Q0D2F5
    Related
    ENSXETP00000061732.2, ENSXETT00000060626.3
    Conserved Domains (2) summary
    cd04165
    Location:151375
    GTPBP1_like; GTP binding protein 1 (GTPBP1)-like family includes GTPBP2
    cl27768
    Location:65563
    SelB; Selenocysteine-specific translation elongation factor [Translation, ribosomal structure and biogenesis]

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    120402593..120425084 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012961207.3XP_012816661.1  GTP-binding protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A6I8PZI5, F7B0T7
    Related
    ENSXETP00000015085.4, ENSXETT00000015085.5
    Conserved Domains (2) summary
    cd04165
    Location:164388
    GTPBP1_like; GTP binding protein 1 (GTPBP1)-like family includes GTPBP2
    COG5258
    Location:78576
    GTPBP1; GTPase [General function prediction only]