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TNFSF8 TNF superfamily member 8 [ Bos taurus (cattle) ]

Gene ID: 574056, updated on 5-Mar-2024

Summary

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Official Symbol
TNFSF8provided by VGNC
Official Full Name
TNF superfamily member 8provided by VGNC
Primary source
VGNC:VGNC:36177
See related
BGD:BT12121; Ensembl:ENSBTAG00000025782
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
TNLG3A; TNFRSF8
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 8 NC_037335.1 (104084879..104113971, complement)

Chromosome 8 - NC_037335.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132346013 Neighboring gene TNF superfamily member 15 Neighboring gene uncharacterized LOC132346014 Neighboring gene uncharacterized LOC132346015 Neighboring gene uncharacterized LOC107132740 Neighboring gene uncharacterized LOC101908167 Neighboring gene uncharacterized LOC112447848 Neighboring gene tenascin C

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037335.1 Chromosome 8 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Comparative genomic analysis of eutherian tumor necrosis factor ligand genes. Premzl M. Immunogenetics, 2016 Feb. PMID 26646413
  2. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  3. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  4. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tumor necrosis factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CD8-positive, alpha-beta T cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in immune response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor necrosis factor ligand superfamily member 8
Names
tumor necrosis factor (ligand) superfamily, member 8
tumor necrosis factor ligand 3A
tumor necrosis factor receptor superfamily, member 8
tumor necrosis factor superfamily member 8

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001025207.1 → NP_001020378.1  tumor necrosis factor ligand superfamily member 8

    See identical proteins and their annotated locations for NP_001020378.1

    Status: PROVISIONAL

    Source sequence(s)
    BT020722
    UniProtKB/TrEMBL
    Q5EA47
    Related
    ENSBTAP00000036314.2, ENSBTAT00000036456.3
    Conserved Domains (1) summary
    pfam00229
    Location:113 → 230
    TNF; TNF(Tumour Necrosis Factor) family

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037335.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    104084879..104113971 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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