U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

akap11 A kinase (PRKA) anchor protein 11 [ Danio rerio (zebrafish) ]

Gene ID: 558595, updated on 27-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
akap11provided by ZNC
Official Full Name
A kinase (PRKA) anchor protein 11provided by ZNC
Primary source
ZFIN:ZDB-GENE-090804-1
See related
Ensembl:ENSDARG00000075435 AllianceGenome:ZFIN:ZDB-GENE-090804-1
Gene type
protein coding
RefSeq status
MODEL
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Summary
Predicted to enable protein kinase A binding activity. Predicted to be involved in protein localization. Predicted to be active in cytoplasm. Orthologous to human AKAP11 (A-kinase anchoring protein 11). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See akap11 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
12
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 9 NC_007120.7 (17971910..18006632)
105 previous assembly GRCz10 (GCF_000002035.5) 9 NC_007120.6 (17964239..17998923)

Chromosome 9 - NC_007120.7Genomic Context describing neighboring genes Neighboring gene von Willebrand factor A domain containing 8 Neighboring gene diacylglycerol kinase, eta Neighboring gene TNF superfamily member 11 Neighboring gene epithelial stromal interaction 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Expression

Go to the top of the page Help
  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Structures, evolutionary relationships and expression profiles of the tumour necrosis factor superfamily and their receptors in black rockfish (Sebastes schlegelii). Cao M, et al. Dev Comp Immunol, 2022 Jul. PMID 35364135
  2. Evolutionary evidence of tumor necrosis factor super family members in the Japanese pufferfish (Takifugu rubripes): Comprehensive genomic identification and expression analysis. Biswas G, et al. Mar Genomics, 2015 Aug. PMID 25792259
  3. RFX transcription factors are essential for hearing in mice. Elkon R, et al. Nat Commun, 2015 Oct 15. PMID 26469318, Free PMC Article
  4. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article
  5. Gene evolution and gene expression after whole genome duplication in fish: the PhyloFish database. Pasquier J, et al. BMC Genomics, 2016 May 18. PMID 27189481, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables protein kinase A binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in protein localization IBA
Inferred from Biological aspect of Ancestor
more info
  
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
  

General protein information

Go to the top of the page Help
Preferred Names
A-kinase anchor protein 11

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007120.7 Reference GRCz11 Primary Assembly

    Range
    17971910..18006632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009304582.3 → XP_009302857.1  A-kinase anchor protein 11 isoform X1

    UniProtKB/TrEMBL
    A0A8M6Z8J5
    Conserved Domains (1) summary
    cl14906
    Location:1726 → 1804
    AKAP_110; A-kinase anchor protein 110 kDa (AKAP 110)

  2. XM_017357775.2 → XP_017213264.1  A-kinase anchor protein 11 isoform X1

    UniProtKB/TrEMBL
    A0A8M6Z8J5
    Conserved Domains (1) summary
    cl14906
    Location:1726 → 1804
    AKAP_110; A-kinase anchor protein 110 kDa (AKAP 110)

  3. XM_021478878.1 → XP_021334553.1  A-kinase anchor protein 11 isoform X2

    UniProtKB/TrEMBL
    A0A8M9Q4X9
    Conserved Domains (1) summary
    cl14906
    Location:1718 → 1796
    AKAP_110; A-kinase anchor protein 110 kDa (AKAP 110)

  4. XM_021478880.1 → XP_021334555.1  A-kinase anchor protein 11 isoform X4

    UniProtKB/TrEMBL
    A0A8M9QK18
    Conserved Domains (1) summary
    cl14906
    Location:1689 → 1767
    AKAP_110; A-kinase anchor protein 110 kDa (AKAP 110)

  5. XM_021478879.1 → XP_021334554.1  A-kinase anchor protein 11 isoform X3

    UniProtKB/TrEMBL
    A0A8M9QB80, E7EZX7, F8W641
    Related
    ENSDARP00000124874.2, ENSDART00000149736.3
    Conserved Domains (1) summary
    cl14906
    Location:1717 → 1795
    AKAP_110; A-kinase anchor protein 110 kDa (AKAP 110)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Tools
Miscellaneous