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mrps24 mitochondrial ribosomal protein S24 [ Danio rerio (zebrafish) ]

Gene ID: 553711, updated on 27-Mar-2024

Summary

Official Symbol
mrps24provided by ZNC
Official Full Name
mitochondrial ribosomal protein S24provided by ZNC
Primary source
ZFIN:ZDB-GENE-050522-393
See related
Ensembl:ENSDARG00000100116 AllianceGenome:ZFIN:ZDB-GENE-050522-393
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
zgc:112331
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in mitochondrial translation. Predicted to be located in mitochondrion and ribosome. Predicted to be part of mitochondrial small ribosomal subunit. Orthologous to human MRPS24 (mitochondrial ribosomal protein S24). [provided by Alliance of Genome Resources, Apr 2022]
Annotation information
Annotation category: partial on reference assembly
Orthologs
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Genomic context

See mrps24 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
4
Annotation release Status Assembly Chr Location
106 current GRCz11 (GCF_000002035.6) 10 NC_007121.7 (45053577..45058862, complement)
105 previous assembly GRCz10 (GCF_000002035.5) 10 NC_007121.6 (45206965..45212250, complement)

Chromosome 10 - NC_007121.7Genomic Context describing neighboring genes Neighboring gene polymerase (DNA directed), mu Neighboring gene glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID), b Neighboring gene NudC domain containing 3 Neighboring gene calcium/calmodulin dependent protein kinase II beta

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

Pathways from PubChem

General gene information

Markers

Clone Names

  • MGC112331

Gene Ontology Provided by ZFIN

Function Evidence Code Pubs
enables structural constituent of ribosome ISS
Inferred from Sequence or Structural Similarity
more info
 
Process Evidence Code Pubs
involved_in mitochondrial translation ISS
Inferred from Sequence or Structural Similarity
more info
 
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit ISS
Inferred from Sequence or Structural Similarity
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
small ribosomal subunit protein uS3m
Names
28S ribosomal protein S24, mitochondrial
MRP-S24
S24mt
NP_001018518.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001020682.2NP_001018518.1  small ribosomal subunit protein uS3m precursor

    See identical proteins and their annotated locations for NP_001018518.1

    Status: VALIDATED

    Source sequence(s)
    CR383667
    UniProtKB/Swiss-Prot
    Q502C1
    Related
    ENSDARP00000134058.1, ENSDART00000159347.2
    Conserved Domains (1) summary
    pfam14955
    Location:32163
    MRP-S24; Mitochondrial ribosome subunit S24

RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007121.7 Reference GRCz11 Primary Assembly

    Range
    45053577..45058862 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)