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snx22 sorting nexin 22 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 549386, updated on 5-Mar-2024

Summary

Official Symbol
snx22provided by Xenbase
Official Full Name
sorting nexin 22provided by Xenbase
Primary source
Xenbase:XB-GENE-946153
See related
Ensembl:ENSXETG00000010652
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs
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Genomic context

See snx22 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
7
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (94581567..94603569, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (84948777..84974492, complement)

Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene casein kinase 1 gamma 1 Neighboring gene peptidylprolyl isomerase B Neighboring gene uncharacterized LOC105947765 Neighboring gene sorting nexin 1

Genomic regions, transcripts, and products

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001016632.2NP_001016632.1  sorting nexin-22

    See identical proteins and their annotated locations for NP_001016632.1

    Status: PROVISIONAL

    Source sequence(s)
    CR760445
    UniProtKB/TrEMBL
    A0A803JG58, Q28IE4
    Related
    ENSXETP00000057273.2, ENSXETT00000057273.4
    Conserved Domains (1) summary
    cd06880
    Location:2112
    PX_SNX22; The phosphoinositide binding Phox Homology domain of Sorting Nexin 22

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    94581567..94603569 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)