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coq7 coenzyme Q7 homolog, ubiquinone [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 548822, updated on 25-Apr-2024

Summary

Official Symbol
coq7provided by Xenbase
Official Full Name
coenzyme Q7 homolog, ubiquinoneprovided by Xenbase
Primary source
Xenbase:XB-GENE-941459
See related
Ensembl:ENSXETG00000002946
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Annotation information
Annotation category: partial on reference assembly
Orthologs
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Genomic context

See coq7 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (32804538..32811896, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (26920650..26927888, complement)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene ITPRIP like 2 Neighboring gene palmitoleoyl-protein carboxylesterase notum2 Neighboring gene ADP ribosylation factor like GTPase 6 interacting protein 1 Neighboring gene ribosomal protein S15a

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
involved_in determination of adult lifespan IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of gene expression IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in regulation of reactive oxygen species metabolic process IBA
Inferred from Biological aspect of Ancestor
more info
 
involved_in ubiquinone biosynthetic process IBA
Inferred from Biological aspect of Ancestor
more info
 
acts_upstream_of_or_within ubiquinone biosynthetic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in extrinsic component of mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
is_active_in mitochondrial inner membrane IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 
is_active_in nucleus IBA
Inferred from Biological aspect of Ancestor
more info
 

General protein information

Preferred Names
5-demethoxyubiquinone hydroxylase, mitochondrial
NP_001016068.2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001016068.3NP_001016068.2  5-demethoxyubiquinone hydroxylase, mitochondrial

    See identical proteins and their annotated locations for NP_001016068.2

    Status: PROVISIONAL

    Source sequence(s)
    BC118749
    UniProtKB/TrEMBL
    A0A803KKL4, Q28EZ6
    Related
    ENSXETP00000006435.4, ENSXETT00000006435.5
    Conserved Domains (1) summary
    pfam03232
    Location:54222
    COQ7; Ubiquinone biosynthesis protein COQ7

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    32804538..32811896 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)