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CD164L2 CD164 molecule like 2 [ Bos taurus (domestic cattle) ]

Gene ID: 539662, updated on 17-Aug-2024

Summary

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Official Symbol
CD164L2provided by VGNC
Official Full Name
CD164 molecule like 2provided by VGNC
Primary source
VGNC:VGNC:27005
See related
Ensembl:ENSBTAG00000019728
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 2 NC_037329.1 (125905963..125909989)

Chromosome 2 - NC_037329.1Genomic Context describing neighboring genes Neighboring gene WASP family member 2 Neighboring gene uncharacterized LOC132343448 Neighboring gene U6 spliceosomal RNA Neighboring gene G protein-coupled receptor 3 Neighboring gene ficolin 3 Neighboring gene mitogen-activated protein kinase kinase kinase 6

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037329.1 Chromosome 2 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC133635

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in cytoplasmic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CD164 sialomucin-like 2 protein
Names
CD164 sialomucin-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076180.1 → NP_001069648.1  CD164 sialomucin-like 2 protein precursor

    See identical proteins and their annotated locations for NP_001069648.1

    Status: PROVISIONAL

    Source sequence(s)
    BC108248
    UniProtKB/TrEMBL
    A0A3Q1MMI0, Q32P58
    Related
    ENSBTAP00000073006.1, ENSBTAT00000068243.2
    Conserved Domains (1) summary
    pfam05283
    Location:54 → 125
    MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037329.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    125905963..125909989
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059875993.1 → XP_059731976.1  CD164 sialomucin-like 2 protein isoform X1

  2. XM_059876008.1 → XP_059731991.1  CD164 sialomucin-like 2 protein isoform X7

  3. XM_059875994.1 → XP_059731977.1  CD164 sialomucin-like 2 protein isoform X2

    UniProtKB/TrEMBL
    A0A3Q1MMI0

  4. XM_059875998.1 → XP_059731981.1  CD164 sialomucin-like 2 protein isoform X3

    UniProtKB/TrEMBL
    A0AAA9TVB9

  5. XM_024976865.2 → XP_024832633.1  CD164 sialomucin-like 2 protein isoform X5

    UniProtKB/TrEMBL
    A0AAA9TVB9
    Conserved Domains (1) summary
    pfam05283
    Location:54 → 173
    MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin

  6. XM_024976861.2 → XP_024832629.1  CD164 sialomucin-like 2 protein isoform X4

    UniProtKB/TrEMBL
    A0AAA9SNE2, A0AAA9TVB9
    Related
    ENSBTAP00000086866.1, ENSBTAT00000098904.1
    Conserved Domains (1) summary
    pfam05283
    Location:54 → 173
    MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin

  7. XM_024976867.2 → XP_024832635.1  CD164 sialomucin-like 2 protein isoform X6

    UniProtKB/TrEMBL
    A0AAA9TVB9
    Related
    ENSBTAP00000061239.2, ENSBTAT00000080976.2
    Conserved Domains (1) summary
    pfam05283
    Location:54 → 173
    MGC-24; Multi-glycosylated core protein 24 (MGC-24), sialomucin
Nucleotide Protein Strain
Heading Accession and Version

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