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E2F5 E2F transcription factor 5 [ Bos taurus (domestic cattle) ]

Gene ID: 539427, updated on 17-Aug-2024

Summary

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Official Symbol
E2F5provided by VGNC
Official Full Name
E2F transcription factor 5provided by VGNC
Primary source
VGNC:VGNC:28289
See related
BGD:BT26317; Ensembl:ENSBTAG00000009378
Gene type
protein coding
RefSeq status
MODEL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 14
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 14 NC_037341.1 (77397209..77433275, complement)

Chromosome 14 - NC_037341.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112449551 Neighboring gene ribosomal biogenesis factor Neighboring gene leucine rich repeat and coiled-coil centrosomal protein 1 Neighboring gene solute carrier family 7 member 13

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037341.1 Chromosome 14 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Characterization of bovine transcripts preferentially expressed in testis and with a putative role in spermatogenesis. Alves BC, et al. Theriogenology, 2011 Oct 1. PMID 21664671
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of RNA polymerase II transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transcription factor E2F5
Names
E2F transcription factor 5, p130-binding

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037341.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    77397209..77433275 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002692830.5 → XP_002692876.1  transcription factor E2F5 isoform X2

    See identical proteins and their annotated locations for XP_002692876.1

    UniProtKB/TrEMBL
    F1MGR7
    Conserved Domains (2) summary
    cd14660
    Location:96 → 200
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:19 → 84
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

  2. XM_005215706.4 → XP_005215763.1  transcription factor E2F5 isoform X1

    See identical proteins and their annotated locations for XP_005215763.1

    UniProtKB/TrEMBL
    F1MGR7
    Related
    ENSBTAP00000012342.7, ENSBTAT00000012342.7
    Conserved Domains (2) summary
    cd14660
    Location:96 → 200
    E2F_DD; Dimerization domain of E2F transcription factors
    pfam02319
    Location:19 → 84
    E2F_TDP; E2F/DP family winged-helix DNA-binding domain

RNA

  1. XR_009490553.1 RNA Sequence

  2. XR_009490554.1 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

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Molecular Biology Databases
Research Materials