AQR aquarius intron-binding spliceosomal factor [Bos taurus (cattle)] - Gene

Summary

Official Symbol: AQRprovided by VGNC
Official Full Name: aquarius intron-binding spliceosomal factorprovided by VGNC
Primary source: VGNC:VGNC:26052
See related: BGD:BT20991; Ensembl:ENSBTAG00000012712
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as: aquarius
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 10

Exon count:: 35

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	10	NC_037337.1 (30358852..30440150, complement)

Chromosome 10 - NC_037337.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

MARC_21173-21174:1027090229:1 (e-PCR)
- UniSTS:268500

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables helicase activity	IEA Inferred from Electronic Annotation more info	PubMed
enables mRNA binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in mRNA splicing, via spliceosome	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of catalytic step 2 spliceosome	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: RNA helicase aquarius

Names: aquarius homolog

NP_001091560.1

EC 3.6.4.13

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001098091.1 → NP_001091560.1 RNA helicase aquarius

See identical proteins and their annotated locations for NP_001091560.1

Status: PROVISIONAL

Source sequence(s)

BC140525

UniProtKB/TrEMBL

A0A3Q1MP16, A5D7E4

Related

ENSBTAP00000073081.1, ENSBTAT00000077178.2

Conserved Domains (4) summary

pfam13086
Location:805 → 1107

AAA_11; AAA domain

pfam13245
Location:808 → 880

AAA_19; Part of AAA domain

pfam16399
Location:18 → 802

Aquarius_N; Intron-binding protein aquarius N-terminus

cl22977
Location:1115 → 1304

UvrD_C_2; UvrD-like helicase C-terminal domain