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TPD52L1 TPD52 like 1 [ Bos taurus (cattle) ]

Gene ID: 534629, updated on 3-Apr-2024

Summary

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Official Symbol
TPD52L1provided by VGNC
Official Full Name
TPD52 like 1provided by VGNC
Primary source
VGNC:VGNC:36245
See related
BGD:BT14550; Ensembl:ENSBTAG00000003336
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See TPD52L1 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 9 NC_037336.1 (25985760..26078941, complement)

Chromosome 9 - NC_037336.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132346208 Neighboring gene HD domain containing 2 Neighboring gene microRNA mir-2477 Neighboring gene uncharacterized LOC112448125 Neighboring gene uncharacterized LOC112448020

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037336.1 Chromosome 9 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in positive regulation of MAP kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of apoptotic signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tumor protein D53
Names
tumor protein D52 like 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076033.1 → NP_001069501.1  tumor protein D53

    See identical proteins and their annotated locations for NP_001069501.1

    Status: PROVISIONAL

    Source sequence(s)
    BC120446
    UniProtKB/TrEMBL
    A0A3Q1MAI5, Q0VBY4
    Related
    ENSBTAP00000090856.1, ENSBTAT00000134228.1
    Conserved Domains (1) summary
    pfam04201
    Location:12 → 192
    TPD52; Tumour protein D52 family

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037336.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    25985760..26078941 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005210717.5 → XP_005210774.1  tumor protein D53 isoform X5

    Related
    ENSBTAP00000096597.1, ENSBTAT00000107588.1
    Conserved Domains (1) summary
    pfam04201
    Location:12 → 129
    TPD52; tumor protein D52 family

  2. XM_005210715.5 → XP_005210772.1  tumor protein D53 isoform X3

    UniProtKB/TrEMBL
    A0A3Q1MAI5
    Related
    ENSBTAP00000092956.1, ENSBTAT00000098919.1
    Conserved Domains (1) summary
    pfam04201
    Location:12 → 174
    TPD52; tumor protein D52 family

  3. XM_005210714.5 → XP_005210771.1  tumor protein D53 isoform X2

    UniProtKB/TrEMBL
    A0A3Q1MAI5
    Related
    ENSBTAP00000004332.5, ENSBTAT00000004332.6
    Conserved Domains (1) summary
    pfam04201
    Location:12 → 187
    TPD52; tumor protein D52 family

  4. XM_010808393.2 → XP_010806695.1  tumor protein D53 isoform X4

    See identical proteins and their annotated locations for XP_010806695.1

    UniProtKB/TrEMBL
    A0A3Q1MAI5
    Conserved Domains (1) summary
    pfam04201
    Location:15 → 163
    TPD52; Tumour protein D52 family

  5. XM_024996740.2 → XP_024852508.1  tumor protein D53 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MAI5
    Conserved Domains (1) summary
    pfam04201
    Location:9 → 189
    TPD52; tumor protein D52 family

  6. XM_059889773.1 → XP_059745756.1  tumor protein D53 isoform X4

Nucleotide Protein Strain
Heading Accession and Version

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