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CSRNP1 cysteine and serine rich nuclear protein 1 [ Bos taurus (cattle) ]

Gene ID: 515406, updated on 5-Mar-2024

Summary

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Official Symbol
CSRNP1provided by VGNC
Official Full Name
cysteine and serine rich nuclear protein 1provided by VGNC
Primary source
VGNC:VGNC:27772
See related
BGD:BT23835; Ensembl:ENSBTAG00000003845
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
AXUD1
Orthologs
human mouse all
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Genomic context

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See CSRNP1 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 22 NC_037349.1 (12478905..12492357, complement)

Chromosome 22 - NC_037349.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 48 Neighboring gene golgi reassembly stacking protein 1 Neighboring gene tetratricopeptide repeat domain 21A Neighboring gene C-C motif chemokine receptor 8 Neighboring gene xin actin binding repeat containing 1 Neighboring gene C-X3-C motif chemokine receptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037349.1 Chromosome 22 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cysteine/serine-rich nuclear protein 1
Names
AXIN1 up-regulated 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001098035.1 → NP_001091504.1  cysteine/serine-rich nuclear protein 1

    See identical proteins and their annotated locations for NP_001091504.1

    Status: PROVISIONAL

    Source sequence(s)
    BT030484
    UniProtKB/TrEMBL
    A5D965
    Related
    ENSBTAP00000005016.5, ENSBTAT00000005016.7
    Conserved Domains (1) summary
    pfam16019
    Location:83 → 304
    CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037349.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    12478905..12492357 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005222458.5 → XP_005222515.1  cysteine/serine-rich nuclear protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A3Q1MAJ6
    Related
    ENSBTAP00000103291.1, ENSBTAT00000126170.1
    Conserved Domains (1) summary
    pfam16019
    Location:100 → 321
    CSRNP_N; Cysteine/serine-rich nuclear protein N-terminus
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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