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HNRNPA1 heterogeneous nuclear ribonucleoprotein A1 [ Bos taurus (cattle) ]

Gene ID: 505093, updated on 5-Mar-2024

Summary

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Gene symbol
HNRNPA1
Gene description
heterogeneous nuclear ribonucleoprotein A1
See related
Ensembl:ENSBTAG00000001553
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
HNRPA1; hnRNP A1
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (25779263..25785665, complement)

Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene COPI coat complex subunit zeta 1 Neighboring gene microRNA mir-148b Neighboring gene spermine synthase-like Neighboring gene nuclear factor, erythroid 2 Neighboring gene chromobox 5 Neighboring gene single-strand-selective monofunctional uracil-DNA glycosylase 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. High pressure liquid chromatography purification of UP1 and UP2, two related single-stranded nucleic acid-binding proteins from calf thymus. Merrill BM, et al. J Biol Chem, 1986 Jan 15. PMID 3941105
  2. Amino acid sequence of UP1, an hnRNP-derived single-stranded nucleic acid binding protein from calf thymus. Merrill BM, et al. Int J Pept Protein Res, 1987 Jan. PMID 3032834
  3. Amino acid sequence of the UP1 calf thymus helix-destabilizing protein and its homology to an analogous protein from mouse myeloma. Williams KR, et al. Proc Natl Acad Sci U S A, 1985 Sep. PMID 2994041, Free PMC Article
  4. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Clone Names

  • MGC128297

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heterogeneous nuclear ribonucleoprotein A1
Names
UP1
helix-destabilizing protein
hnRNP core protein A1
single-strand RNA-binding protein
unwinding protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001045911.1 → NP_001039376.1  heterogeneous nuclear ribonucleoprotein A1

    See identical proteins and their annotated locations for NP_001039376.1

    Status: PROVISIONAL

    Source sequence(s)
    BC105413
    UniProtKB/Swiss-Prot
    P09867, Q2KJC4
    Related
    ENSBTAP00000013110.5, ENSBTAT00000013110.5
    Conserved Domains (3) summary
    pfam11627
    Location:255 → 292
    HnRNPA1; Nuclear factor hnRNPA1
    cd12582
    Location:105 → 184
    RRM2_hnRNPA3; RNA recognition motif 2 (RRM2) found in heterogeneous nuclear ribonucleoprotein A3 (hnRNP A3) and similar proteins
    cd12761
    Location:12 → 92
    RRM1_hnRNPA1; RNA recognition motif 1 (RRM1) found in heterogeneous nuclear ribonucleoprotein A1 (hnRNP A1) and similar proteins

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    25779263..25785665 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059886174.1 → XP_059742157.1  heterogeneous nuclear ribonucleoprotein A1 isoform X2

    UniProtKB/Swiss-Prot
    P09867, Q2KJC4

  2. XM_059886173.1 → XP_059742156.1  heterogeneous nuclear ribonucleoprotein A1 isoform X2

    UniProtKB/Swiss-Prot
    P09867, Q2KJC4

  3. XM_059886172.1 → XP_059742155.1  heterogeneous nuclear ribonucleoprotein A1 isoform X1

    UniProtKB/TrEMBL
    F1MTY3

  4. XM_059886171.1 → XP_059742154.1  heterogeneous nuclear ribonucleoprotein A1 isoform X1

    UniProtKB/TrEMBL
    F1MTY3
    Related
    ENSBTAP00000002033.6, ENSBTAT00000002033.7
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P09867.2 GenPept UniProtKB/Swiss-Prot:P09867

Gene LinkOut

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