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rab7a RAB7A, member RAS oncogene family [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 493388, updated on 25-Apr-2024

Summary

Official Symbol
rab7aprovided by Xenbase
Official Full Name
RAB7A, member RAS oncogene familyprovided by Xenbase
Primary source
Xenbase:XB-GENE-483564
See related
Ensembl:ENSXETG00000016176
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
rab7; pro2706
Orthologs
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Genomic context

See rab7a in Genome Data Viewer
Location:
chromosome: 4
Exon count:
6
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 4 NC_030680.2 (135596556..135628545)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 4 NC_030680.1 (125077540..125109720)

Chromosome 4 - NC_030680.2Genomic Context describing neighboring genes Neighboring gene fibroleukin Neighboring gene ribophorin I Neighboring gene rbm43-like Neighboring gene H1.10 linker histone

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC79525, MGC80674

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
acts_upstream_of_or_within lipid catabolic process IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ras-related protein Rab-7a
NP_001008026.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001008025.1NP_001008026.1  ras-related protein Rab-7a

    See identical proteins and their annotated locations for NP_001008026.1

    Status: PROVISIONAL

    Source sequence(s)
    BC080905
    UniProtKB/TrEMBL
    A0A803JWB5, F6UMW9, Q66JI1
    Related
    ENSXETP00000035269.3, ENSXETT00000035269.5
    Conserved Domains (1) summary
    cd01862
    Location:9179
    Rab7; Rab GTPase family 7 (Rab7)

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030680.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    135596556..135628545
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)