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CCDC22 coiled-coil domain containing 22 [ Canis lupus familiaris (dog) ]

Gene ID: 491875, updated on 17-Aug-2024

Summary

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Official Symbol
CCDC22provided by VGNC
Official Full Name
coiled-coil domain containing 22provided by VGNC
Primary source
VGNC:VGNC:38828
See related
Ensembl:ENSCAFG00845025196
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
17
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (42471025..42484896)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (16708063..16721934)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (42537397..42551268)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (42454985..42468855)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (42442443..42456314)

Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene synaptophysin Neighboring gene calcium voltage-gated channel subunit alpha1 F Neighboring gene forkhead box P3 Neighboring gene protein phosphatase 1 regulatory subunit 3F Neighboring gene uncharacterized LOC100688778

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cullin family protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coiled-coil domain-containing protein 22

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051843.1 Reference ROS_Cfam_1.0

    Range
    42471025..42484896
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038450010.1 → XP_038305938.1  coiled-coil domain-containing protein 22 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NEF6
    Conserved Domains (1) summary
    pfam05667
    Location:1 → 592
    DUF812; Protein of unknown function (DUF812)

  2. XM_038450011.1 → XP_038305939.1  coiled-coil domain-containing protein 22 isoform X2

    UniProtKB/TrEMBL
    A0A8C0L9J8, A0A8C0NEF6
    Related
    ENSCAFP00845034846.1, ENSCAFT00845044470.1
    Conserved Domains (1) summary
    pfam05667
    Location:1 → 590
    DUF812; Protein of unknown function (DUF812)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049299.1 Alternate UMICH_Zoey_3.1

    Range
    42454985..42468855
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038523467.1 → XP_038379395.1  coiled-coil domain-containing protein 22 isoform X1

    Conserved Domains (1) summary
    pfam05667
    Location:1 → 592
    DUF812; Protein of unknown function (DUF812)

  2. XM_038523468.1 → XP_038379396.1  coiled-coil domain-containing protein 22 isoform X2

    Conserved Domains (1) summary
    pfam05667
    Location:1 → 590
    DUF812; Protein of unknown function (DUF812)

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

    Range
    42442443..42456314
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038651948.1 → XP_038507876.1  coiled-coil domain-containing protein 22 isoform X1

    Conserved Domains (1) summary
    pfam05667
    Location:1 → 592
    DUF812; Protein of unknown function (DUF812)

  2. XM_038651949.1 → XP_038507877.1  coiled-coil domain-containing protein 22 isoform X2

    Conserved Domains (1) summary
    pfam05667
    Location:1 → 590
    DUF812; Protein of unknown function (DUF812)

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

    Range
    42537397..42551268
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038587442.1 → XP_038443370.1  coiled-coil domain-containing protein 22 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NEF6
    Conserved Domains (1) summary
    pfam05667
    Location:1 → 592
    DUF812; Protein of unknown function (DUF812)

  2. XM_038587443.1 → XP_038443371.1  coiled-coil domain-containing protein 22 isoform X2

    UniProtKB/TrEMBL
    A0A8C0L9J8, A0A8C0NEF6
    Conserved Domains (1) summary
    pfam05667
    Location:1 → 590
    DUF812; Protein of unknown function (DUF812)

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    16708063..16721934
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038464267.1 → XP_038320195.1  coiled-coil domain-containing protein 22 isoform X1

    UniProtKB/TrEMBL
    A0A8C0NEF6
    Conserved Domains (1) summary
    pfam05667
    Location:1 → 592
    DUF812; Protein of unknown function (DUF812)

  2. XM_548995.7 → XP_548995.2  coiled-coil domain-containing protein 22 isoform X2

    UniProtKB/TrEMBL
    A0A8C0L9J8, A0A8C0NEF6
    Conserved Domains (1) summary
    pfam05667
    Location:1 → 590
    DUF812; Protein of unknown function (DUF812)
Nucleotide Protein
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