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LRRC3 leucine rich repeat containing 3 [ Canis lupus familiaris (dog) ]

Gene ID: 487800, updated on 17-Aug-2024

Summary

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Official Symbol
LRRC3provided by VGNC
Official Full Name
leucine rich repeat containing 3provided by VGNC
Primary source
VGNC:VGNC:53033
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 31
Exon count:
2
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 31 NC_051835.1 (37808251..37812002)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 31 NC_006613.4 (37420414..37424165)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 31 NC_049252.1 (38155114..38158865)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 31 NC_049291.1 (37679257..37683008)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 31 NC_049772.1 (37657734..37661485)

Chromosome 31 - NC_051835.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 410 Neighboring gene transient receptor potential cation channel subfamily M member 2 Neighboring gene thrombospondin type laminin G domain and EAR repeats Neighboring gene keratin-associated protein 10-7-like Neighboring gene keratin-associated protein 10-12-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051835.1 Reference ROS_Cfam_1.0

    Range
    37808251..37812002
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038443152.1 → XP_038299080.1  leucine-rich repeat-containing protein 3

    UniProtKB/TrEMBL
    A0A8C0R408
    Conserved Domains (3) summary
    smart00013
    Location:94 → 130
    LRRNT; Leucine rich repeat N-terminal domain
    sd00031
    Location:110 → 130
    LRR_1; leucine-rich repeat [structural motif]
    pfam13855
    Location:131 → 187
    LRR_8; Leucine rich repeat

RNA

  1. XR_005305170.1 RNA Sequence

  2. XR_005305169.1 RNA Sequence

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049291.1 Alternate UMICH_Zoey_3.1

    Range
    37679257..37683008
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038518062.1 → XP_038373990.1  leucine-rich repeat-containing protein 3

    Conserved Domains (3) summary
    smart00013
    Location:94 → 130
    LRRNT; Leucine rich repeat N-terminal domain
    sd00031
    Location:110 → 130
    LRR_1; leucine-rich repeat [structural motif]
    pfam13855
    Location:131 → 187
    LRR_8; Leucine rich repeat

RNA

  1. XR_005348622.1 RNA Sequence

  2. XR_005348621.1 RNA Sequence

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049772.1 Alternate UNSW_CanFamBas_1.0

    Range
    37657734..37661485
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038646027.1 → XP_038501955.1  leucine-rich repeat-containing protein 3

    Conserved Domains (3) summary
    smart00013
    Location:94 → 130
    LRRNT; Leucine rich repeat N-terminal domain
    sd00031
    Location:110 → 130
    LRR_1; leucine-rich repeat [structural motif]
    pfam13855
    Location:131 → 187
    LRR_8; Leucine rich repeat

  2. XM_038646026.1 → XP_038501954.1  leucine-rich repeat-containing protein 3

    Conserved Domains (3) summary
    smart00013
    Location:94 → 130
    LRRNT; Leucine rich repeat N-terminal domain
    sd00031
    Location:110 → 130
    LRR_1; leucine-rich repeat [structural motif]
    pfam13855
    Location:131 → 187
    LRR_8; Leucine rich repeat

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049252.1 Alternate UU_Cfam_GSD_1.0

    Range
    38155114..38158865
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038581625.1 → XP_038437553.1  leucine-rich repeat-containing protein 3

    UniProtKB/TrEMBL
    A0A8C0R408
    Conserved Domains (3) summary
    smart00013
    Location:94 → 130
    LRRNT; Leucine rich repeat N-terminal domain
    sd00031
    Location:110 → 130
    LRR_1; leucine-rich repeat [structural motif]
    pfam13855
    Location:131 → 187
    LRR_8; Leucine rich repeat

RNA

  1. XR_005382465.1 RNA Sequence

  2. XR_005382464.1 RNA Sequence

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006613.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    37420414..37424165
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038461907.1 → XP_038317835.1  leucine-rich repeat-containing protein 3

    UniProtKB/TrEMBL
    A0A8C0R408
    Conserved Domains (3) summary
    smart00013
    Location:94 → 130
    LRRNT; Leucine rich repeat N-terminal domain
    sd00031
    Location:110 → 130
    LRR_1; leucine-rich repeat [structural motif]
    pfam13855
    Location:131 → 187
    LRR_8; Leucine rich repeat

RNA

  1. XR_005316814.1 RNA Sequence

  2. XR_005316813.1 RNA Sequence

Nucleotide Protein
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