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CLVS2 clavesin 2 [ Canis lupus familiaris (dog) ]

Gene ID: 484109, updated on 5-Mar-2024

Summary

Official Symbol
CLVS2provided by VGNC
Official Full Name
clavesin 2provided by VGNC
Primary source
VGNC:VGNC:39373
See related
Ensembl:ENSCAFG00845000009
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
RLBP1L2
Orthologs
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Genomic context

See CLVS2 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (62420539..62491590)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (63025578..63096929)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (62791442..62862485)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (62354446..62425787)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (62142463..62213279)

Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111096205 Neighboring gene uncharacterized LOC119870787 Neighboring gene sphingomyelin phosphodiesterase acid like 3A Neighboring gene uncharacterized LOC119870674 Neighboring gene uncharacterized LOC111096208 Neighboring gene triadin

Genomic regions, transcripts, and products

General protein information

Preferred Names
clavesin-2; LOW QUALITY PROTEIN: clavesin-2
Names
retinaldehyde binding protein 1-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051805.1 Reference ROS_Cfam_1.0

    Range
    62420539..62491590
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038654796.1XP_038510724.1  clavesin-2

    UniProtKB/TrEMBL
    A0A8C0LBY1, A0A8C0MT98, A0A8C0PME0, A0A8I3MJH9
    Conserved Domains (2) summary
    smart01100
    Location:2975
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    cd00170
    Location:106251
    SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
  2. XM_038654797.1XP_038510725.1  clavesin-2

    UniProtKB/TrEMBL
    A0A8C0LBY1, A0A8C0MT98, A0A8C0PME0, A0A8I3MJH9
    Related
    ENSCAFP00845000007.1, ENSCAFT00845000012.1
    Conserved Domains (2) summary
    smart01100
    Location:2975
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    cd00170
    Location:106251
    SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049261.1 Alternate UMICH_Zoey_3.1

    Range
    62354446..62425787
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038466015.1XP_038321943.1  LOW QUALITY PROTEIN: clavesin-2

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

    Range
    62142463..62213279
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038590998.1XP_038446926.1  clavesin-2

    Conserved Domains (2) summary
    smart01100
    Location:2975
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    cd00170
    Location:106251
    SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
  2. XM_038590999.1XP_038446927.1  clavesin-2

    Conserved Domains (2) summary
    smart01100
    Location:2975
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    cd00170
    Location:106251
    SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
  3. XM_038591000.1XP_038446928.1  clavesin-2

    Conserved Domains (2) summary
    smart01100
    Location:2975
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    cd00170
    Location:106251
    SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

    Range
    62791442..62862485
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038526697.1XP_038382625.1  clavesin-2

    UniProtKB/TrEMBL
    A0A8C0LBY1, A0A8C0MT98, A0A8C0PME0, A0A8I3MJH9
    Conserved Domains (2) summary
    smart01100
    Location:2975
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    cd00170
    Location:106251
    SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
  2. XM_038526698.1XP_038382626.1  clavesin-2

    UniProtKB/TrEMBL
    A0A8C0LBY1, A0A8C0MT98, A0A8C0PME0, A0A8I3MJH9
    Conserved Domains (2) summary
    smart01100
    Location:2975
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    cd00170
    Location:106251
    SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    63025578..63096929
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038549376.1XP_038405304.1  clavesin-2

    UniProtKB/TrEMBL
    A0A8C0LBY1, A0A8C0MT98, A0A8C0PME0, A0A8I3MJH9
    Conserved Domains (2) summary
    smart01100
    Location:2975
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    cd00170
    Location:106251
    SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...
  2. XM_038549453.1XP_038405381.1  clavesin-2

    UniProtKB/TrEMBL
    A0A8C0LBY1, A0A8C0MT98, A0A8C0PME0, A0A8I3MJH9
    Conserved Domains (2) summary
    smart01100
    Location:2975
    CRAL_TRIO_N; CRAL/TRIO, N-terminal domain
    cd00170
    Location:106251
    SEC14; Sec14p-like lipid-binding domain. Found in secretory proteins, such as S. cerevisiae phosphatidylinositol transfer protein (Sec14p), and in lipid regulated proteins such as RhoGAPs, RhoGEFs and neurofibromin (NF1). SEC14 domain of Dbl is known to ...