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BATF2 basic leucine zipper ATF-like transcription factor 2 [ Canis lupus familiaris (dog) ]

Gene ID: 483754, updated on 5-Mar-2024

Summary

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Official Symbol
BATF2provided by VGNC
Official Full Name
basic leucine zipper ATF-like transcription factor 2provided by VGNC
Primary source
VGNC:VGNC:38386
See related
Ensembl:ENSCAFG00845027773
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See BATF2 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
4
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 18 NC_051822.1 (53224334..53237554)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 18 NC_006600.4 (50790750..50803973)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 18 NC_049239.1 (52688966..52702188)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 18 NC_049278.1 (52319561..52332779)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 18 NC_049759.1 (51904628..51917849)

Chromosome 18 - NC_051822.1Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene sorting nexin 15 Neighboring gene ADP ribosylation factor like GTPase 2 Neighboring gene nucleoside diphosphate kinase A-like Neighboring gene glycoprotein hormone subunit alpha 2 Neighboring gene protein phosphatase 2 regulatory subunit B'beta

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
basic leucine zipper transcriptional factor ATF-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051822.1 Reference ROS_Cfam_1.0

    Range
    53224334..53237554
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038425084.1 → XP_038281012.1  basic leucine zipper transcriptional factor ATF-like 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KQS0, A0A8C0MS36, A0A8I3PVA1, A0A8I3PYX7, A0A8P0PG97
    Related
    ENSCAFP00845038491.1, ENSCAFT00845049053.1
    Conserved Domains (1) summary
    cd14701
    Location:17 → 74
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain

  2. XM_038425085.1 → XP_038281013.1  basic leucine zipper transcriptional factor ATF-like 2 isoform X2

    UniProtKB/TrEMBL
    A0A8I3PYX7, A0A8I3Q2P1, A0A8P0PG97, A0A8P0SIK0
    Related
    ENSCAFP00845038436.1, ENSCAFT00845048994.1
    Conserved Domains (1) summary
    cd14701
    Location:17 → 73
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain

  3. XM_038425083.1 → XP_038281011.1  basic leucine zipper transcriptional factor ATF-like 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KQS0, A0A8C0MS36, A0A8I3PVA1, A0A8I3PYX7, A0A8P0PG97
    Conserved Domains (1) summary
    cd14701
    Location:17 → 74
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049278.1 Alternate UMICH_Zoey_3.1

    Range
    52319561..52332779
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038501344.1 → XP_038357272.1  basic leucine zipper transcriptional factor ATF-like 2 isoform X1

    Conserved Domains (1) summary
    cd14701
    Location:17 → 74
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain

  2. XM_038501345.1 → XP_038357273.1  basic leucine zipper transcriptional factor ATF-like 2 isoform X2

    Conserved Domains (1) summary
    cd14701
    Location:17 → 73
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain

  3. XM_038501343.1 → XP_038357271.1  basic leucine zipper transcriptional factor ATF-like 2 isoform X1

    Conserved Domains (1) summary
    cd14701
    Location:17 → 74
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049759.1 Alternate UNSW_CanFamBas_1.0

    Range
    51904628..51917849
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038628156.1 → XP_038484084.1  basic leucine zipper transcriptional factor ATF-like 2 isoform X1

    Conserved Domains (1) summary
    cd14701
    Location:17 → 74
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain

  2. XM_038628157.1 → XP_038484085.1  basic leucine zipper transcriptional factor ATF-like 2 isoform X2

    Conserved Domains (1) summary
    cd14701
    Location:17 → 73
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain

  3. XM_038628155.1 → XP_038484083.1  basic leucine zipper transcriptional factor ATF-like 2 isoform X1

    Conserved Domains (1) summary
    cd14701
    Location:17 → 74
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049239.1 Alternate UU_Cfam_GSD_1.0

    Range
    52688966..52702188
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038564024.1 → XP_038419952.1  basic leucine zipper transcriptional factor ATF-like 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KQS0, A0A8C0MS36, A0A8I3PVA1, A0A8I3PYX7, A0A8P0PG97
    Conserved Domains (1) summary
    cd14701
    Location:17 → 74
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain

  2. XM_038564025.1 → XP_038419953.1  basic leucine zipper transcriptional factor ATF-like 2 isoform X2

    UniProtKB/TrEMBL
    A0A8I3PYX7, A0A8I3Q2P1, A0A8P0PG97, A0A8P0SIK0
    Conserved Domains (1) summary
    cd14701
    Location:17 → 73
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain

  3. XM_038564023.1 → XP_038419951.1  basic leucine zipper transcriptional factor ATF-like 2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KQS0, A0A8C0MS36, A0A8I3PVA1, A0A8I3PYX7, A0A8P0PG97
    Conserved Domains (1) summary
    cd14701
    Location:17 → 74
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006600.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    50790750..50803973
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005631497.4 → XP_005631554.1  basic leucine zipper transcriptional factor ATF-like 2 isoform X1

    See identical proteins and their annotated locations for XP_005631554.1

    UniProtKB/TrEMBL
    A0A8C0KQS0, A0A8C0MS36, A0A8I3PVA1, A0A8I3PYX7, A0A8P0PG97
    Conserved Domains (1) summary
    cd14701
    Location:17 → 74
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain

  2. XM_022405681.2 → XP_022261389.1  basic leucine zipper transcriptional factor ATF-like 2 isoform X2

    UniProtKB/TrEMBL
    A0A8I3PYX7, A0A8I3Q2P1, A0A8P0PG97, A0A8P0SIK0
    Conserved Domains (1) summary
    cd14701
    Location:17 → 73
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain

  3. XM_540875.7 → XP_540875.3  basic leucine zipper transcriptional factor ATF-like 2 isoform X1

    See identical proteins and their annotated locations for XP_540875.3

    UniProtKB/TrEMBL
    A0A8C0KQS0, A0A8C0MS36, A0A8I3PVA1, A0A8I3PYX7, A0A8P0PG97
    Conserved Domains (1) summary
    cd14701
    Location:17 → 74
    bZIP_BATF; Basic leucine zipper (bZIP) domain of BATF proteins: a DNA-binding and dimerization domain
Nucleotide Protein
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