FNDC4 fibronectin type III domain containing 4 [Canis lupus familiaris (dog)] - Gene

Summary

Official Symbol: FNDC4provided by VGNC
Official Full Name: fibronectin type III domain containing 4provided by VGNC
Primary source: VGNC:VGNC:40930
See related: Ensembl:ENSCAFG00845008316
Gene type: protein coding
RefSeq status: MODEL
Organism: Canis lupus familiaris (sub-species: familiaris)
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 17

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
106	current	ROS_Cfam_1.0 (GCF_014441545.1)	17	NC_051821.1 (21750138..21753175, complement)
106	current	Dog10K_Boxer_Tasha (GCF_000002285.5)	17	NC_006599.4 (21320535..21323572, complement)
106	current	UU_Cfam_GSD_1.0 (GCF_011100685.1)	17	NC_049238.1 (21494475..21497512, complement)
106	current	UMICH_Zoey_3.1 (GCF_005444595.1)	17	NC_049277.1 (21436741..21439783, complement)
106	current	UNSW_CanFamBas_1.0 (GCF_013276365.1)	17	NC_049758.1 (21446221..21449258, complement)

Chromosome 17 - NC_051821.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

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General gene information

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Markers

RH102212 (e-PCR)
- UniSTS:96546

Homology

NCBI Orthologs

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: fibronectin type III domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

NC_051821.1 Reference ROS_Cfam_1.0

Range

21750138..21753175 complement

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mRNA and Protein(s)

XM_038691060.1 → XP_038546988.1 fibronectin type III domain-containing protein 4

UniProtKB/TrEMBL

A0A8C0LF80, A0A8C0N7V3, A0A8P0SAQ3

Related

ENSCAFP00845011333.1, ENSCAFT00845014631.1

Conserved Domains (1) summary

cd00063
Location:43 → 133

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

Alternate UMICH_Zoey_3.1

Genomic

NC_049277.1 Alternate UMICH_Zoey_3.1

Range

21436741..21439783 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038498551.1 → XP_038354479.1 fibronectin type III domain-containing protein 4

Conserved Domains (1) summary

cd00063
Location:43 → 133

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

Alternate UNSW_CanFamBas_1.0

Genomic

NC_049758.1 Alternate UNSW_CanFamBas_1.0

Range

21446221..21449258 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038625175.1 → XP_038481103.1 fibronectin type III domain-containing protein 4

Conserved Domains (1) summary

cd00063
Location:43 → 133

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

Alternate UU_Cfam_GSD_1.0

Genomic

NC_049238.1 Alternate UU_Cfam_GSD_1.0

Range

21494475..21497512 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_038561104.1 → XP_038417032.1 fibronectin type III domain-containing protein 4

UniProtKB/TrEMBL

A0A8C0LF80, A0A8C0N7V3, A0A8P0SAQ3

Conserved Domains (1) summary

cd00063
Location:43 → 133

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

NC_006599.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

Range

21320535..21323572 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_005630268.3 → XP_005630325.1 fibronectin type III domain-containing protein 4

UniProtKB/TrEMBL

A0A8C0LF80, A0A8C0N7V3, A0A8P0SAQ3

Conserved Domains (1) summary

cd00063
Location:43 → 133

FN3; Fibronectin type 3 domain; One of three types of internal repeats found in the plasma protein fibronectin. Its tenth fibronectin type III repeat contains an RGD cell recognition sequence in a flexible loop between 2 strands. Approximately 2% of all ...