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RSPO2 R-spondin 2 [ Canis lupus familiaris (dog) ]

Gene ID: 482004, updated on 17-Aug-2024

Summary

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Official Symbol
RSPO2provided by VGNC
Official Full Name
R-spondin 2provided by VGNC
Primary source
VGNC:VGNC:45783
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
7
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (8873544..9022401, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (8550551..8728117, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (8823008..8971462, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (8627417..8772877, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 13 NC_049754.1 (8745404..8896677, complement)

Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111098519 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC102154405 Neighboring gene eukaryotic translation initiation factor 3 subunit E

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Coat variation in the domestic dog is governed by variants in three genes. Cadieu E, et al. Science, 2009 Oct 2. PMID 19713490, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
R-spondin-2
Names
R-spondin 2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051817.1 Reference ROS_Cfam_1.0

    Range
    8873544..9022401 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038684848.1 → XP_038540776.1  R-spondin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHB7, A0A8C0QN03, A0A8I3NC08
    Conserved Domains (2) summary
    pfam15913
    Location:40 → 141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145 → 198
    TSP1_spondin; Spondin-like TSP1 domain

  2. XM_038684849.1 → XP_038540777.1  R-spondin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHB7, A0A8C0QN03, A0A8I3NC08
    Conserved Domains (2) summary
    pfam15913
    Location:40 → 141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145 → 198
    TSP1_spondin; Spondin-like TSP1 domain

  3. XM_038684850.1 → XP_038540778.1  R-spondin-2 isoform X2

    Conserved Domains (2) summary
    pfam15913
    Location:1 → 74
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:78 → 131
    TSP1_spondin; Spondin-like TSP1 domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049273.1 Alternate UMICH_Zoey_3.1

    Range
    8627417..8772877 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038493073.1 → XP_038349001.1  R-spondin-2 isoform X1

    Conserved Domains (2) summary
    pfam15913
    Location:40 → 141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145 → 198
    TSP1_spondin; Spondin-like TSP1 domain

  2. XM_038493074.1 → XP_038349002.1  R-spondin-2 isoform X1

    Conserved Domains (2) summary
    pfam15913
    Location:40 → 141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145 → 198
    TSP1_spondin; Spondin-like TSP1 domain

  3. XM_038493075.1 → XP_038349003.1  R-spondin-2 isoform X2

    Conserved Domains (2) summary
    pfam15913
    Location:1 → 74
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:78 → 131
    TSP1_spondin; Spondin-like TSP1 domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049754.1 Alternate UNSW_CanFamBas_1.0

    Range
    8745404..8896677 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038619232.1 → XP_038475160.1  R-spondin-2 isoform X1

    Conserved Domains (2) summary
    pfam15913
    Location:40 → 141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145 → 198
    TSP1_spondin; Spondin-like TSP1 domain

  2. XM_038619233.1 → XP_038475161.1  R-spondin-2 isoform X1

    Conserved Domains (2) summary
    pfam15913
    Location:40 → 141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145 → 198
    TSP1_spondin; Spondin-like TSP1 domain

  3. XM_038619234.1 → XP_038475162.1  R-spondin-2 isoform X2

    Conserved Domains (2) summary
    pfam15913
    Location:1 → 74
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:78 → 131
    TSP1_spondin; Spondin-like TSP1 domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

    Range
    8823008..8971462 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038555332.1 → XP_038411260.1  R-spondin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHB7, A0A8C0QN03, A0A8I3NC08
    Conserved Domains (2) summary
    pfam15913
    Location:40 → 141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145 → 198
    TSP1_spondin; Spondin-like TSP1 domain

  2. XM_038555333.1 → XP_038411261.1  R-spondin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8C0QHB7, A0A8C0QN03, A0A8I3NC08
    Conserved Domains (2) summary
    pfam15913
    Location:40 → 141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145 → 198
    TSP1_spondin; Spondin-like TSP1 domain

  3. XM_038555334.1 → XP_038411262.1  R-spondin-2 isoform X2

    Conserved Domains (2) summary
    pfam15913
    Location:1 → 74
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:78 → 131
    TSP1_spondin; Spondin-like TSP1 domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    8550551..8728117 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005627871.4 → XP_005627928.1  R-spondin-2 isoform X1

    See identical proteins and their annotated locations for XP_005627928.1

    UniProtKB/TrEMBL
    A0A8C0QHB7, A0A8C0QN03, A0A8I3NC08
    Conserved Domains (2) summary
    pfam15913
    Location:40 → 141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145 → 198
    TSP1_spondin; Spondin-like TSP1 domain

  2. XM_539125.6 → XP_539125.2  R-spondin-2 isoform X1

    See identical proteins and their annotated locations for XP_539125.2

    UniProtKB/TrEMBL
    A0A8C0QHB7, A0A8C0QN03, A0A8I3NC08
    Conserved Domains (2) summary
    pfam15913
    Location:40 → 141
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:145 → 198
    TSP1_spondin; Spondin-like TSP1 domain

  3. XM_022426651.2 → XP_022282359.2  R-spondin-2 isoform X2

    Conserved Domains (2) summary
    pfam15913
    Location:1 → 74
    Furin-like_2; Furin-like repeat, cysteine-rich
    pfam19028
    Location:78 → 131
    TSP1_spondin; Spondin-like TSP1 domain
Nucleotide Protein
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