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FATE1 fetal and adult testis expressed 1 [ Canis lupus familiaris (dog) ]

Gene ID: 481076, updated on 11-Apr-2024

Summary

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Official Symbol
FATE1provided by VGNC
Official Full Name
fetal and adult testis expressed 1provided by VGNC
Primary source
VGNC:VGNC:40746
See related
Ensembl:ENSCAFG00845025266
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human all
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Genomic context

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See FATE1 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) X NC_051843.1 (121895797..121902455)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) X NC_006621.4 (105057988..105064646)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) X NC_049260.1 (120981604..120988262)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) X NC_049299.1 (118616049..118622707)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) X NC_049780.1 (121098992..121105650)

Chromosome X - NC_051843.1Genomic Context describing neighboring genes Neighboring gene PAS domain containing repressor 1 Neighboring gene mitogen-activated protein kinase kinase kinase kinase 4-like Neighboring gene proline rich and Gla domain 3 Neighboring gene cyclic nucleotide gated channel subunit alpha 2 Neighboring gene thioredoxin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of mitochondrial calcium ion concentration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondria-associated endoplasmic reticulum membrane contact site IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrial outer membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fetal and adult testis-expressed transcript protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051843.1 Reference ROS_Cfam_1.0

    Range
    121895797..121902455
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038451138.1 → XP_038307066.1  fetal and adult testis-expressed transcript protein

    UniProtKB/TrEMBL
    A0A8C0R6G8, A0A8C0R6J1, A0A8C0SMQ7, A0A8I3Q6E3
    Related
    ENSCAFP00845034920.1, ENSCAFT00845044574.1
    Conserved Domains (1) summary
    pfam05644
    Location:85 → 182
    Miff; Mitochondrial and peroxisomal fission factor Mff

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049299.1 Alternate UMICH_Zoey_3.1

    Range
    118616049..118622707
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038524611.1 → XP_038380539.1  fetal and adult testis-expressed transcript protein

    Conserved Domains (1) summary
    pfam05644
    Location:85 → 182
    Miff; Mitochondrial and peroxisomal fission factor Mff

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049780.1 Alternate UNSW_CanFamBas_1.0

    Range
    121098992..121105650
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038653085.1 → XP_038509013.1  fetal and adult testis-expressed transcript protein

    Conserved Domains (1) summary
    pfam05644
    Location:85 → 182
    Miff; Mitochondrial and peroxisomal fission factor Mff

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049260.1 Alternate UU_Cfam_GSD_1.0

    Range
    120981604..120988262
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038588579.1 → XP_038444507.1  fetal and adult testis-expressed transcript protein

    UniProtKB/TrEMBL
    A0A8C0R6G8, A0A8C0R6J1, A0A8C0SMQ7, A0A8I3Q6E3
    Conserved Domains (1) summary
    pfam05644
    Location:85 → 182
    Miff; Mitochondrial and peroxisomal fission factor Mff

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006621.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    105057988..105064646
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_538196.6 → XP_538196.1  fetal and adult testis-expressed transcript protein

    UniProtKB/TrEMBL
    A0A8C0R6G8, A0A8C0R6J1, A0A8C0SMQ7, A0A8I3Q6E3
    Conserved Domains (1) summary
    pfam05644
    Location:85 → 182
    Miff; Mitochondrial and peroxisomal fission factor Mff
Nucleotide Protein
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