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NDC80 NDC80 kinetochore complex component [ Canis lupus familiaris (dog) ]

Gene ID: 480190, updated on 5-Mar-2024

Summary

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Official Symbol
NDC80provided by VGNC
Official Full Name
NDC80 kinetochore complex componentprovided by VGNC
Primary source
VGNC:VGNC:43670
See related
Ensembl:ENSCAFG00845002475
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See NDC80 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
18
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 7 NC_051811.1 (69329940..69378870)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 7 NC_006589.4 (68723201..68772189)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 7 NC_049228.1 (69329927..69378829)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 7 NC_049267.1 (69012589..69061471)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 7 NC_049748.1 (69032710..69081627)

Chromosome 7 - NC_051811.1Genomic Context describing neighboring genes Neighboring gene casein kinase I-like Neighboring gene tubulin beta chain-like Neighboring gene methyltransferase 4, N6-adenosine Neighboring gene uncharacterized LOC102152944 Neighboring gene actin, clone 302-like Neighboring gene structural maintenance of chromosomes flexible hinge domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in attachment of mitotic spindle microtubules to kinetochore IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Ndc80 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
kinetochore protein NDC80 homolog
Names
NDC80 homolog, kinetochore complex component
NDC80 kinetochore complex component homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051811.1 Reference ROS_Cfam_1.0

    Range
    69329940..69378870
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038672513.1 → XP_038528441.1  kinetochore protein NDC80 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0L7M5, A0A8C0ND51, A0A8I3ML90
    Related
    ENSCAFP00845003490.1, ENSCAFT00845004368.1
    Conserved Domains (2) summary
    COG5185
    Location:1 → 613
    HEC1; Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam03801
    Location:51 → 206
    Ndc80_HEC; HEC/Ndc80p family

  2. XM_038672514.1 → XP_038528442.1  kinetochore protein NDC80 homolog isoform X2

    Conserved Domains (2) summary
    COG5185
    Location:64 → 597
    HEC1; Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam03801
    Location:44 → 190
    Ndc80_HEC; HEC/Ndc80p family

  3. XM_038672515.1 → XP_038528443.1  kinetochore protein NDC80 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8C0RK53
    Conserved Domains (2) summary
    COG5185
    Location:1 → 578
    HEC1; Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam03801
    Location:51 → 206
    Ndc80_HEC; HEC/Ndc80p family

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049267.1 Alternate UMICH_Zoey_3.1

    Range
    69012589..69061471
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038482269.1 → XP_038338197.1  kinetochore protein NDC80 homolog isoform X1

    Conserved Domains (2) summary
    COG5185
    Location:1 → 613
    HEC1; Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam03801
    Location:51 → 206
    Ndc80_HEC; HEC/Ndc80p family

  2. XM_038482270.1 → XP_038338198.1  kinetochore protein NDC80 homolog isoform X2

    Conserved Domains (2) summary
    COG5185
    Location:64 → 597
    HEC1; Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam03801
    Location:44 → 190
    Ndc80_HEC; HEC/Ndc80p family

  3. XM_038482271.1 → XP_038338199.1  kinetochore protein NDC80 homolog isoform X3

    Conserved Domains (2) summary
    COG5185
    Location:1 → 578
    HEC1; Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam03801
    Location:51 → 206
    Ndc80_HEC; HEC/Ndc80p family

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049748.1 Alternate UNSW_CanFamBas_1.0

    Range
    69032710..69081627
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038607830.1 → XP_038463758.1  kinetochore protein NDC80 homolog isoform X1

    Conserved Domains (2) summary
    COG5185
    Location:1 → 613
    HEC1; Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam03801
    Location:51 → 206
    Ndc80_HEC; HEC/Ndc80p family

  2. XM_038607831.1 → XP_038463759.1  kinetochore protein NDC80 homolog isoform X2

    Conserved Domains (2) summary
    COG5185
    Location:64 → 597
    HEC1; Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam03801
    Location:44 → 190
    Ndc80_HEC; HEC/Ndc80p family

  3. XM_038607832.1 → XP_038463760.1  kinetochore protein NDC80 homolog isoform X3

    Conserved Domains (2) summary
    COG5185
    Location:1 → 578
    HEC1; Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam03801
    Location:51 → 206
    Ndc80_HEC; HEC/Ndc80p family

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049228.1 Alternate UU_Cfam_GSD_1.0

    Range
    69329927..69378829
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038543704.1 → XP_038399632.1  kinetochore protein NDC80 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0L7M5, A0A8C0ND51, A0A8I3ML90
    Conserved Domains (2) summary
    COG5185
    Location:1 → 613
    HEC1; Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam03801
    Location:51 → 206
    Ndc80_HEC; HEC/Ndc80p family

  2. XM_038543705.1 → XP_038399633.1  kinetochore protein NDC80 homolog isoform X2

    Conserved Domains (2) summary
    COG5185
    Location:64 → 597
    HEC1; Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam03801
    Location:44 → 190
    Ndc80_HEC; HEC/Ndc80p family

  3. XM_038543706.1 → XP_038399634.1  kinetochore protein NDC80 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8C0RK53
    Conserved Domains (2) summary
    COG5185
    Location:1 → 578
    HEC1; Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam03801
    Location:51 → 206
    Ndc80_HEC; HEC/Ndc80p family

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006589.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    68723201..68772189
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_537313.7 → XP_537313.2  kinetochore protein NDC80 homolog isoform X1

    UniProtKB/TrEMBL
    A0A8C0L7M5, A0A8C0ND51, A0A8I3ML90
    Conserved Domains (2) summary
    COG5185
    Location:1 → 613
    HEC1; Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam03801
    Location:51 → 206
    Ndc80_HEC; HEC/Ndc80p family

  2. XM_022421541.2 → XP_022277249.1  kinetochore protein NDC80 homolog isoform X2

    Conserved Domains (2) summary
    COG5185
    Location:64 → 597
    HEC1; Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam03801
    Location:44 → 190
    Ndc80_HEC; HEC/Ndc80p family

  3. XM_038576700.1 → XP_038432628.1  kinetochore protein NDC80 homolog isoform X3

    UniProtKB/TrEMBL
    A0A8C0RK53
    Conserved Domains (2) summary
    COG5185
    Location:1 → 578
    HEC1; Protein involved in chromosome segregation, interacts with SMC proteins [Cell cycle control, cell division, chromosome partitioning]
    pfam03801
    Location:51 → 206
    Ndc80_HEC; HEC/Ndc80p family
Nucleotide Protein
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