U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RFC1 replication factor C subunit 1 [ Canis lupus familiaris (dog) ]

Gene ID: 479112, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
RFC1provided by VGNC
Official Full Name
replication factor C subunit 1provided by VGNC
Primary source
VGNC:VGNC:45492
See related
Ensembl:ENSCAFG00845004687
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RFC1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
26
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 3 NC_051807.1 (73835991..73910047)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 3 NC_006585.4 (75609032..75683153)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 3 NC_049224.1 (73635081..73709119)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 3 NC_049263.1 (73102007..73176125)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 3 NC_049744.1 (73248932..73323088)

Chromosome 3 - NC_051807.1Genomic Context describing neighboring genes Neighboring gene lipoic acid synthetase Neighboring gene ribosomal protein L9 Neighboring gene klotho beta Neighboring gene WD repeat domain 19 Neighboring gene U4 spliceosomal RNA Neighboring gene uncharacterized LOC119871253 Neighboring gene uncharacterized LOC111095295 Neighboring gene kelch like family member 5

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

Pathways from PubChem

Go to the top of the page

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA clamp loader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA clamp unloader activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of DNA replication factor C complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
replication factor C subunit 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051807.1 Reference ROS_Cfam_1.0

    Range
    73835991..73910047
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038661973.1 → XP_038517901.1  replication factor C subunit 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MNN9
    Conserved Domains (4) summary
    PTZ00121
    Location:44 → 588
    PTZ00121; MAEBL; Provisional
    PRK04195
    Location:628 → 1052
    PRK04195; replication factor C large subunit; Provisional
    cd17752
    Location:445 → 523
    BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
    pfam08519
    Location:964 → 1117
    RFC1; Replication factor RFC1 C terminal domain

  2. XM_038661974.1 → XP_038517902.1  replication factor C subunit 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I3MNN9
    Conserved Domains (4) summary
    PTZ00121
    Location:19 → 542
    PTZ00121; MAEBL; Provisional
    PRK04195
    Location:582 → 1007
    PRK04195; replication factor C large subunit; Provisional
    cd17752
    Location:399 → 477
    BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
    pfam08519
    Location:919 → 1072
    RFC1; Replication factor RFC1 C terminal domain

  3. XM_038661972.1 → XP_038517900.1  replication factor C subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8I3MLM2, A0A8I3MNN9
    Related
    ENSCAFP00845006606.1, ENSCAFT00845008394.1
    Conserved Domains (4) summary
    PTZ00121
    Location:44 → 588
    PTZ00121; MAEBL; Provisional
    PRK04195
    Location:628 → 1053
    PRK04195; replication factor C large subunit; Provisional
    cd17752
    Location:445 → 523
    BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
    pfam08519
    Location:965 → 1118
    RFC1; Replication factor RFC1 C terminal domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049263.1 Alternate UMICH_Zoey_3.1

    Range
    73102007..73176125
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038472494.1 → XP_038328422.1  replication factor C subunit 1 isoform X1

    Conserved Domains (4) summary
    PTZ00121
    Location:44 → 588
    PTZ00121; MAEBL; Provisional
    PRK04195
    Location:628 → 1053
    PRK04195; replication factor C large subunit; Provisional
    cd17752
    Location:445 → 523
    BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
    pfam08519
    Location:965 → 1118
    RFC1; Replication factor RFC1 C terminal domain

  2. XM_038472495.1 → XP_038328423.1  replication factor C subunit 1 isoform X2

    Conserved Domains (4) summary
    PTZ00121
    Location:44 → 588
    PTZ00121; MAEBL; Provisional
    PRK04195
    Location:628 → 1052
    PRK04195; replication factor C large subunit; Provisional
    cd17752
    Location:445 → 523
    BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
    pfam08519
    Location:964 → 1117
    RFC1; Replication factor RFC1 C terminal domain

  3. XM_038472496.1 → XP_038328424.1  replication factor C subunit 1 isoform X3

    Conserved Domains (4) summary
    PTZ00121
    Location:19 → 542
    PTZ00121; MAEBL; Provisional
    PRK04195
    Location:582 → 1007
    PRK04195; replication factor C large subunit; Provisional
    cd17752
    Location:399 → 477
    BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
    pfam08519
    Location:919 → 1072
    RFC1; Replication factor RFC1 C terminal domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049744.1 Alternate UNSW_CanFamBas_1.0

    Range
    73248932..73323088
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038597767.1 → XP_038453695.1  replication factor C subunit 1 isoform X2

    Conserved Domains (4) summary
    PTZ00121
    Location:44 → 588
    PTZ00121; MAEBL; Provisional
    PRK04195
    Location:628 → 1052
    PRK04195; replication factor C large subunit; Provisional
    cd17752
    Location:445 → 523
    BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
    pfam08519
    Location:964 → 1117
    RFC1; Replication factor RFC1 C terminal domain

  2. XM_038597768.1 → XP_038453696.1  replication factor C subunit 1 isoform X3

  3. XM_038597766.1 → XP_038453694.1  replication factor C subunit 1 isoform X1

    Conserved Domains (4) summary
    PTZ00121
    Location:44 → 588
    PTZ00121; MAEBL; Provisional
    PRK04195
    Location:628 → 1053
    PRK04195; replication factor C large subunit; Provisional
    cd17752
    Location:445 → 523
    BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
    pfam08519
    Location:965 → 1118
    RFC1; Replication factor RFC1 C terminal domain

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049224.1 Alternate UU_Cfam_GSD_1.0

    Range
    73635081..73709119
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038533470.1 → XP_038389398.1  replication factor C subunit 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MNN9
    Conserved Domains (4) summary
    PTZ00121
    Location:44 → 588
    PTZ00121; MAEBL; Provisional
    PRK04195
    Location:628 → 1052
    PRK04195; replication factor C large subunit; Provisional
    cd17752
    Location:445 → 523
    BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
    pfam08519
    Location:964 → 1117
    RFC1; Replication factor RFC1 C terminal domain

  2. XM_038533471.1 → XP_038389399.1  replication factor C subunit 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I3MNN9
    Conserved Domains (4) summary
    PTZ00121
    Location:19 → 542
    PTZ00121; MAEBL; Provisional
    PRK04195
    Location:582 → 1007
    PRK04195; replication factor C large subunit; Provisional
    cd17752
    Location:399 → 477
    BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
    pfam08519
    Location:919 → 1072
    RFC1; Replication factor RFC1 C terminal domain

  3. XM_038533469.1 → XP_038389397.1  replication factor C subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8I3MLM2, A0A8I3MNN9
    Conserved Domains (4) summary
    PTZ00121
    Location:44 → 588
    PTZ00121; MAEBL; Provisional
    PRK04195
    Location:628 → 1053
    PRK04195; replication factor C large subunit; Provisional
    cd17752
    Location:445 → 523
    BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
    pfam08519
    Location:965 → 1118
    RFC1; Replication factor RFC1 C terminal domain

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006585.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    75609032..75683153
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038480808.1 → XP_038336736.1  replication factor C subunit 1 isoform X1

    UniProtKB/TrEMBL
    A0A8I3MLM2, A0A8I3MNN9
    Conserved Domains (4) summary
    PTZ00121
    Location:44 → 588
    PTZ00121; MAEBL; Provisional
    PRK04195
    Location:628 → 1053
    PRK04195; replication factor C large subunit; Provisional
    cd17752
    Location:445 → 523
    BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
    pfam08519
    Location:965 → 1118
    RFC1; Replication factor RFC1 C terminal domain

  2. XM_038480817.1 → XP_038336745.1  replication factor C subunit 1 isoform X2

    UniProtKB/TrEMBL
    A0A8I3MNN9
    Conserved Domains (4) summary
    PTZ00121
    Location:44 → 588
    PTZ00121; MAEBL; Provisional
    PRK04195
    Location:628 → 1052
    PRK04195; replication factor C large subunit; Provisional
    cd17752
    Location:445 → 523
    BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
    pfam08519
    Location:964 → 1117
    RFC1; Replication factor RFC1 C terminal domain

  3. XM_005618621.4 → XP_005618678.1  replication factor C subunit 1 isoform X3

    UniProtKB/TrEMBL
    A0A8I3MNN9
    Conserved Domains (4) summary
    PTZ00121
    Location:19 → 542
    PTZ00121; MAEBL; Provisional
    PRK04195
    Location:582 → 1007
    PRK04195; replication factor C large subunit; Provisional
    cd17752
    Location:399 → 477
    BRCT_RFC1; BRCT domain of replication factor C subunit 1 (RFC1) and similar proteins
    pfam08519
    Location:919 → 1072
    RFC1; Replication factor RFC1 C terminal domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials
Miscellaneous