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GTF3C3 general transcription factor IIIC subunit 3 [ Canis lupus familiaris (dog) ]

Gene ID: 478851, updated on 5-Mar-2024

Summary

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Official Symbol
GTF3C3provided by VGNC
Official Full Name
general transcription factor IIIC subunit 3provided by VGNC
Primary source
VGNC:VGNC:41553
See related
Ensembl:ENSCAFG00845024524
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See GTF3C3 in Genome Data Viewer
Location:
chromosome: 37
Exon count:
18
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 37 NC_051841.1 (6249800..6288042, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 37 NC_006619.4 (7307403..7345412, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 37 NC_049258.1 (6238434..6276800, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 37 NC_049297.1 (6249442..6287648, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 37 NC_049778.1 (6216216..6255042, complement)

Chromosome 37 - NC_051841.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 150 Neighboring gene uncharacterized LOC111094354 Neighboring gene uncharacterized LOC106558323 Neighboring gene small nucleolar RNA SNORD56 Neighboring gene uncharacterized LOC102157205 Neighboring gene chromosome 37 C2orf66 homolog Neighboring gene post-GPI attachment to proteins inositol deacylase 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transcription by RNA polymerase III IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of transcription factor TFIIIC complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
general transcription factor 3C polypeptide 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051841.1 Reference ROS_Cfam_1.0

    Range
    6249800..6288042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038447471.1 → XP_038303399.1  general transcription factor 3C polypeptide 3

    UniProtKB/TrEMBL
    A0A8C0T603, A0A8C0T746, A0A8I3S8Q4
    Related
    ENSCAFP00845033948.1, ENSCAFT00845043317.1
    Conserved Domains (3) summary
    smart00028
    Location:809 → 839
    TPR; Tetratricopeptide repeats
    TIGR02917
    Location:143 → 511
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:181 → 209
    TPR; TPR repeat [structural motif]

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049297.1 Alternate UMICH_Zoey_3.1

    Range
    6249442..6287648 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038521534.1 → XP_038377462.1  general transcription factor 3C polypeptide 3

    Conserved Domains (3) summary
    smart00028
    Location:809 → 839
    TPR; Tetratricopeptide repeats
    TIGR02917
    Location:143 → 511
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:181 → 209
    TPR; TPR repeat [structural motif]

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049778.1 Alternate UNSW_CanFamBas_1.0

    Range
    6216216..6255042 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038649638.1 → XP_038505566.1  general transcription factor 3C polypeptide 3

    Conserved Domains (3) summary
    smart00028
    Location:809 → 839
    TPR; Tetratricopeptide repeats
    TIGR02917
    Location:143 → 511
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:181 → 209
    TPR; TPR repeat [structural motif]

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049258.1 Alternate UU_Cfam_GSD_1.0

    Range
    6238434..6276800 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038585230.1 → XP_038441158.1  general transcription factor 3C polypeptide 3

    UniProtKB/TrEMBL
    A0A8C0T603, A0A8C0T746, A0A8I3S8Q4
    Conserved Domains (3) summary
    smart00028
    Location:809 → 839
    TPR; Tetratricopeptide repeats
    TIGR02917
    Location:143 → 511
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:181 → 209
    TPR; TPR repeat [structural motif]

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006619.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    7307403..7345412 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_536013.7 → XP_536013.2  general transcription factor 3C polypeptide 3

    UniProtKB/TrEMBL
    A0A8C0T603, A0A8C0T746, A0A8I3S8Q4
    Conserved Domains (3) summary
    smart00028
    Location:809 → 839
    TPR; Tetratricopeptide repeats
    TIGR02917
    Location:143 → 511
    PEP_TPR_lipo; putative PEP-CTERM system TPR-repeat lipoprotein
    sd00006
    Location:181 → 209
    TPR; TPR repeat [structural motif]
Nucleotide Protein
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