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VWA5B1 von Willebrand factor A domain containing 5B1 [ Canis lupus familiaris (dog) ]

Gene ID: 478205, updated on 5-Mar-2024

Summary

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Gene symbol
VWA5B1
Gene description
von Willebrand factor A domain containing 5B1
See related
Ensembl:ENSCAFG00845002735
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See VWA5B1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
24
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 2 NC_051806.1 (79091703..79148807, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 2 NC_006584.4 (75039081..75096319, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 2 NC_049223.1 (77994518..78045378, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 2 NC_049262.1 (75911018..75968050, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 2 NC_049743.1 (76922662..76973670, complement)

Chromosome 2 - NC_051806.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102157062 Neighboring gene uncharacterized LOC119870456 Neighboring gene uncharacterized LOC119870457 Neighboring gene uncharacterized LOC111093718 Neighboring gene uncharacterized LOC119863942 Neighboring gene uncharacterized LOC119870056

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
von Willebrand factor A domain-containing protein 5B1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051806.1 Reference ROS_Cfam_1.0

    Range
    79091703..79148807 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038660088.1 → XP_038516016.1  von Willebrand factor A domain-containing protein 5B1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0Q672
    Conserved Domains (2) summary
    cd01461
    Location:341 → 510
    vWA_interalpha_trypsin_inhibitor; vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to ...
    pfam13757
    Location:2 → 79
    VIT_2; Vault protein inter-alpha-trypsin domain

  2. XM_038660089.1 → XP_038516017.1  von Willebrand factor A domain-containing protein 5B1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0Q672, A0A8I3RQX8
    Related
    ENSCAFP00845003932.1, ENSCAFT00845004929.1
    Conserved Domains (3) summary
    PHA03307
    Location:590 → 817
    PHA03307; transcriptional regulator ICP4; Provisional
    cd01461
    Location:358 → 527
    vWA_interalpha_trypsin_inhibitor; vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to ...
    pfam13757
    Location:2 → 79
    VIT_2; Vault protein inter-alpha-trypsin domain

  3. XM_038660087.1 → XP_038516015.1  von Willebrand factor A domain-containing protein 5B1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0Q672, A0A8I3MN12
    Related
    ENSCAFP00845003899.1, ENSCAFT00845004877.1
    Conserved Domains (2) summary
    cd01461
    Location:358 → 527
    vWA_interalpha_trypsin_inhibitor; vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to ...
    pfam13757
    Location:2 → 79
    VIT_2; Vault protein inter-alpha-trypsin domain

  4. XM_038660090.1 → XP_038516018.1  von Willebrand factor A domain-containing protein 5B1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0Q672
    Conserved Domains (2) summary
    cd01461
    Location:358 → 527
    vWA_interalpha_trypsin_inhibitor; vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to ...
    pfam13757
    Location:2 → 79
    VIT_2; Vault protein inter-alpha-trypsin domain

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049262.1 Alternate UMICH_Zoey_3.1

    Range
    75911018..75968050 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038470881.1 → XP_038326809.1  von Willebrand factor A domain-containing protein 5B1 isoform X2

    Conserved Domains (2) summary
    cd01461
    Location:341 → 510
    vWA_interalpha_trypsin_inhibitor; vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to ...
    pfam13757
    Location:2 → 79
    VIT_2; Vault protein inter-alpha-trypsin domain

  2. XM_038470882.1 → XP_038326810.1  von Willebrand factor A domain-containing protein 5B1 isoform X3

    Conserved Domains (3) summary
    PHA03307
    Location:590 → 817
    PHA03307; transcriptional regulator ICP4; Provisional
    cd01461
    Location:358 → 527
    vWA_interalpha_trypsin_inhibitor; vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to ...
    pfam13757
    Location:2 → 79
    VIT_2; Vault protein inter-alpha-trypsin domain

  3. XM_038470880.1 → XP_038326808.1  von Willebrand factor A domain-containing protein 5B1 isoform X1

    Conserved Domains (2) summary
    cd01461
    Location:358 → 527
    vWA_interalpha_trypsin_inhibitor; vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to ...
    pfam13757
    Location:2 → 79
    VIT_2; Vault protein inter-alpha-trypsin domain

  4. XM_038470883.1 → XP_038326811.1  von Willebrand factor A domain-containing protein 5B1 isoform X4

    Conserved Domains (2) summary
    cd01461
    Location:358 → 527
    vWA_interalpha_trypsin_inhibitor; vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to ...
    pfam13757
    Location:2 → 79
    VIT_2; Vault protein inter-alpha-trypsin domain

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049743.1 Alternate UNSW_CanFamBas_1.0

    Range
    76922662..76973670 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038595997.1 → XP_038451925.1  von Willebrand factor A domain-containing protein 5B1 isoform X2

  2. XM_038595998.1 → XP_038451926.1  von Willebrand factor A domain-containing protein 5B1 isoform X3

  3. XM_038595996.1 → XP_038451924.1  von Willebrand factor A domain-containing protein 5B1 isoform X1

  4. XM_038595999.1 → XP_038451927.1  von Willebrand factor A domain-containing protein 5B1 isoform X4

RNA

  1. XR_005390657.1 RNA Sequence

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049223.1 Alternate UU_Cfam_GSD_1.0

    Range
    77994518..78045378 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038531758.1 → XP_038387686.1  von Willebrand factor A domain-containing protein 5B1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0MPT0

  2. XM_038531759.1 → XP_038387687.1  von Willebrand factor A domain-containing protein 5B1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0MPT0

  3. XM_038531757.1 → XP_038387685.1  von Willebrand factor A domain-containing protein 5B1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0MPT0

  4. XM_038531760.1 → XP_038387688.1  von Willebrand factor A domain-containing protein 5B1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0MPT0

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006584.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    75039081..75096319 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038463716.1 → XP_038319644.1  von Willebrand factor A domain-containing protein 5B1 isoform X2

    UniProtKB/TrEMBL
    A0A8C0Q672
    Conserved Domains (2) summary
    cd01461
    Location:341 → 510
    vWA_interalpha_trypsin_inhibitor; vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to ...
    pfam13757
    Location:2 → 79
    VIT_2; Vault protein inter-alpha-trypsin domain

  2. XM_038463717.1 → XP_038319645.1  von Willebrand factor A domain-containing protein 5B1 isoform X3

    UniProtKB/TrEMBL
    A0A8C0Q672, A0A8P0NLN9
    Conserved Domains (3) summary
    PHA03307
    Location:590 → 817
    PHA03307; transcriptional regulator ICP4; Provisional
    cd01461
    Location:358 → 527
    vWA_interalpha_trypsin_inhibitor; vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to ...
    pfam13757
    Location:2 → 79
    VIT_2; Vault protein inter-alpha-trypsin domain

  3. XM_038463712.1 → XP_038319640.1  von Willebrand factor A domain-containing protein 5B1 isoform X1

    UniProtKB/TrEMBL
    A0A8C0Q672, A0A8P0TR97
    Conserved Domains (2) summary
    cd01461
    Location:358 → 527
    vWA_interalpha_trypsin_inhibitor; vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to ...
    pfam13757
    Location:2 → 79
    VIT_2; Vault protein inter-alpha-trypsin domain

  4. XM_038463719.1 → XP_038319647.1  von Willebrand factor A domain-containing protein 5B1 isoform X4

    UniProtKB/TrEMBL
    A0A8C0Q672
    Conserved Domains (2) summary
    cd01461
    Location:358 → 527
    vWA_interalpha_trypsin_inhibitor; vWA_interalpha trypsin inhibitor (ITI): ITI is a glycoprotein composed of three polypeptides- two heavy chains and one light chain (bikunin). Bikunin confers the protease-inhibitor function while the heavy chains are involved in rendering stability to ...
    pfam13757
    Location:2 → 79
    VIT_2; Vault protein inter-alpha-trypsin domain

RNA

  1. XR_005318366.1 RNA Sequence

Nucleotide Protein
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