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STMN2 stathmin 2 [ Canis lupus familiaris (dog) ]

Gene ID: 477918, updated on 5-Mar-2024

Summary

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Official Symbol
STMN2provided by VGNC
Official Full Name
stathmin 2provided by VGNC
Primary source
VGNC:VGNC:46926
See related
Ensembl:ENSCAFG00845029665
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See STMN2 in Genome Data Viewer
Location:
chromosome: 29
Exon count:
5
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 29 NC_051833.1 (27179142..27228977)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 29 NC_006611.4 (27329341..27379157)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 29 NC_049250.1 (27620016..27669831)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 29 NC_049289.1 (27224785..27274552)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 29 NC_049770.1 (27263476..27313267)

Chromosome 29 - NC_051833.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119866718 Neighboring gene uncharacterized LOC111093175 Neighboring gene uncharacterized LOC111093209 Neighboring gene U6 spliceosomal RNA Neighboring gene tigger transposable element-derived protein 1-like Neighboring gene hes related family bHLH transcription factor with YRPW motif 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microtubule polymerization or depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in growth cone IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stathmin-2
Names
stathmin-like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051833.1 Reference ROS_Cfam_1.0

    Range
    27179142..27228977
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038441443.1 → XP_038297371.1  stathmin-2

    UniProtKB/TrEMBL
    A0A8C0N0K4, A0A8C0T155, A0A8I3Q724
    Related
    ENSCAFP00845041228.1, ENSCAFT00845052539.1
    Conserved Domains (1) summary
    pfam00836
    Location:39 → 174
    Stathmin; Stathmin family

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049289.1 Alternate UMICH_Zoey_3.1

    Range
    27224785..27274552
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038516020.1 → XP_038371948.1  stathmin-2

    Conserved Domains (1) summary
    pfam00836
    Location:39 → 174
    Stathmin; Stathmin family

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049770.1 Alternate UNSW_CanFamBas_1.0

    Range
    27263476..27313267
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038643830.1 → XP_038499758.1  stathmin-2

    Conserved Domains (1) summary
    pfam00836
    Location:39 → 174
    Stathmin; Stathmin family

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049250.1 Alternate UU_Cfam_GSD_1.0

    Range
    27620016..27669831
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038579579.1 → XP_038435507.1  stathmin-2

    UniProtKB/TrEMBL
    A0A8C0N0K4, A0A8C0T155, A0A8I3Q724
    Conserved Domains (1) summary
    pfam00836
    Location:39 → 174
    Stathmin; Stathmin family

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006611.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    27329341..27379157
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_855591.6 → XP_860684.1  stathmin-2

    See identical proteins and their annotated locations for XP_860684.1

    UniProtKB/TrEMBL
    A0A8C0N0K4, A0A8C0T155, A0A8I3Q724
    Conserved Domains (1) summary
    pfam00836
    Location:39 → 174
    Stathmin; Stathmin family
Nucleotide Protein
Heading Accession and Version

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