ADAT1 adenosine deaminase tRNA specific 1 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: ADAT1provided by VGNC
Official Full Name: adenosine deaminase tRNA specific 1provided by VGNC
Primary source: VGNC:VGNC:5665
Locus tag: CK820_G0042708
See related: Ensembl:ENSPTRG00000008363
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 16

Exon count:: 11

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	18	NC_072416.2 (73705648..73736842, complement)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	16	NC_072414.1 (73694065..73736918, complement)

Chromosome 18 - NC_072416.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

D10S275 (e-PCR)
- UniSTS:147992

D8S2279 (e-PCR)
- UniSTS:473907

D15S1477 (e-PCR)
- UniSTS:474482

D1S1423 (e-PCR)
- UniSTS:149619

G35510 (e-PCR)
- UniSTS:44150

G63326 (e-PCR)
- UniSTS:140439

L17971 (e-PCR)
- UniSTS:43966

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables RNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables tRNA-specific adenosine deaminase activity	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in tRNA processing	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: tRNA-specific adenosine deaminase 1

XP_016785690.2

EC 3.5.4.34

XP_016785693.2

EC 3.5.4.34

XP_054524447.1

EC 3.5.4.34

XP_063653511.1

EC 3.5.4.34

XP_063653512.1

EC 3.5.4.34

XP_063653513.1

EC 3.5.4.34

XP_063653514.1

EC 3.5.4.34

XP_063653515.1

EC 3.5.4.34

XP_063653516.1

EC 3.5.4.34

XP_063653517.1

EC 3.5.4.34

XP_063653518.1

EC 3.5.4.34

XP_063653519.1

EC 3.5.4.34

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072416.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

73705648..73736842 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_063797444.1 → XP_063653514.1 tRNA-specific adenosine deaminase 1 isoform X3
XM_063797446.1 → XP_063653516.1 tRNA-specific adenosine deaminase 1 isoform X3
XM_063797445.1 → XP_063653515.1 tRNA-specific adenosine deaminase 1 isoform X3
XM_016930201.4 → XP_016785690.2 tRNA-specific adenosine deaminase 1 isoform X1
XM_054668472.2 → XP_054524447.1 tRNA-specific adenosine deaminase 1 isoform X1
XM_016930204.3 → XP_016785693.2 tRNA-specific adenosine deaminase 1 isoform X4
XM_063797447.1 → XP_063653517.1 tRNA-specific adenosine deaminase 1 isoform X5

UniProtKB/TrEMBL

A0A2J8Q685, A0A6D2XYI6, H2QBJ1, K7B9C7
XM_063797441.1 → XP_063653511.1 tRNA-specific adenosine deaminase 1 isoform X2

UniProtKB/TrEMBL

A0A2J8Q685, A0A6D2XYI6, H2QBJ1, K7B9C7, K7CWU3
XM_063797449.1 → XP_063653519.1 tRNA-specific adenosine deaminase 1 isoform X6
XM_063797448.1 → XP_063653518.1 tRNA-specific adenosine deaminase 1 isoform X5

UniProtKB/TrEMBL

A0A2J8Q685, A0A6D2XYI6, H2QBJ1, K7B9C7
XM_063797442.1 → XP_063653512.1 tRNA-specific adenosine deaminase 1 isoform X2

UniProtKB/TrEMBL

A0A2J8Q685, A0A6D2XYI6, H2QBJ1, K7B9C7, K7CWU3
XM_063797443.1 → XP_063653513.1 tRNA-specific adenosine deaminase 1 isoform X2

UniProtKB/TrEMBL

A0A2J8Q685, A0A6D2XYI6, H2QBJ1, K7B9C7, K7CWU3