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EEF1D eukaryotic translation elongation factor 1 delta [ Pan troglodytes (chimpanzee) ]

Gene ID: 464444, updated on 17-Aug-2024

Summary

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Official Symbol
EEF1Dprovided by VGNC
Official Full Name
eukaryotic translation elongation factor 1 deltaprovided by VGNC
Primary source
VGNC:VGNC:6667
Locus tag
CK820_G0029255
See related
Ensembl:ENSPTRG00000020660
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 7
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 7 NC_072405.2 (153934562..153952539, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 8 NC_072406.1 (158537212..158554946, complement)

Chromosome 7 - NC_072405.2Genomic Context describing neighboring genes Neighboring gene maestro heat like repeat family member 6 Neighboring gene nicotinate phosphoribosyltransferase Neighboring gene tigger transposable element derived 5 Neighboring gene pyrroline-5-carboxylate reductase 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation elongation factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translational elongation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of eukaryotic translation elongation factor 1 complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongation factor 1-delta
Names
eukaryotic translation elongation factor 1 delta (guanine nucleotide exchange protein)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072405.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    153934562..153952539 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016959994.3 → XP_016815483.1  elongation factor 1-delta isoform X9

    UniProtKB/TrEMBL
    A0A2I3TAZ4, A0A2J8LFV2, A0A6D2XDC3, G2HFT3
    Conserved Domains (2) summary
    pfam00736
    Location:198 → 281
    EF1_GNE; EF-1 guanine nucleotide exchange domain
    pfam10587
    Location:159 → 186
    EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region

  2. XM_016960001.3 → XP_016815490.1  elongation factor 1-delta isoform X10

    UniProtKB/TrEMBL
    A0A2I3TRF3, A0A2J8LFV0, A0A2J8LFW1, A0A6D2XNZ3
    Related
    ENSPTRP00000091825.1
    Conserved Domains (2) summary
    pfam00736
    Location:174 → 257
    EF1_GNE; EF-1 guanine nucleotide exchange domain
    pfam10587
    Location:135 → 162
    EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region

  3. XM_016959995.4 → XP_016815484.1  elongation factor 1-delta isoform X9

    UniProtKB/TrEMBL
    A0A2I3TAZ4, A0A2J8LFV2, A0A6D2XDC3, G2HFT3
    Conserved Domains (2) summary
    pfam00736
    Location:198 → 281
    EF1_GNE; EF-1 guanine nucleotide exchange domain
    pfam10587
    Location:159 → 186
    EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region

  4. XM_063816646.1 → XP_063672716.1  elongation factor 1-delta isoform X9

    UniProtKB/TrEMBL
    A0A2I3TAZ4, A0A2J8LFV2, A0A6D2XDC3, G2HFT3

  5. XM_016960002.3 → XP_016815491.1  elongation factor 1-delta isoform X10

    UniProtKB/TrEMBL
    A0A2I3TRF3, A0A2J8LFV0, A0A2J8LFW1, A0A6D2XNZ3
    Conserved Domains (2) summary
    pfam00736
    Location:174 → 257
    EF1_GNE; EF-1 guanine nucleotide exchange domain
    pfam10587
    Location:135 → 162
    EF-1_beta_acid; Eukaryotic elongation factor 1 beta central acidic region

  6. XM_063816644.1 → XP_063672714.1  elongation factor 1-delta isoform X7

    UniProtKB/TrEMBL
    A0A2J8LFW5

  7. XM_054657555.2 → XP_054513530.2  elongation factor 1-delta isoform X5

    UniProtKB/TrEMBL
    A0A2J8LFW5

  8. XM_054657554.2 → XP_054513529.2  elongation factor 1-delta isoform X5

    UniProtKB/TrEMBL
    A0A2J8LFW5

  9. XM_063816649.1 → XP_063672719.1  elongation factor 1-delta isoform X10

    UniProtKB/TrEMBL
    A0A2I3TRF3, A0A2J8LFV0, A0A2J8LFW1, A0A6D2XNZ3

  10. XM_063816647.1 → XP_063672717.1  elongation factor 1-delta isoform X9

    UniProtKB/TrEMBL
    A0A2I3TAZ4, A0A2J8LFV2, A0A6D2XDC3, G2HFT3

  11. XM_063816645.1 → XP_063672715.1  elongation factor 1-delta isoform X9

    UniProtKB/TrEMBL
    A0A2I3TAZ4, A0A2J8LFV2, A0A6D2XDC3, G2HFT3

  12. XM_016959989.4 → XP_016815478.4  elongation factor 1-delta isoform X5

    UniProtKB/TrEMBL
    A0A2J8LFW5

  13. XM_063816642.1 → XP_063672712.1  elongation factor 1-delta isoform X7

    UniProtKB/TrEMBL
    A0A2J8LFW5

  14. XM_063816640.1 → XP_063672710.1  elongation factor 1-delta isoform X7

    UniProtKB/TrEMBL
    A0A2J8LFW5

  15. XM_063816638.1 → XP_063672708.1  elongation factor 1-delta isoform X6

    UniProtKB/TrEMBL
    A0A2J8LFW5

  16. XM_063816636.1 → XP_063672706.1  elongation factor 1-delta isoform X6

    UniProtKB/TrEMBL
    A0A2J8LFW5

  17. XM_063816630.1 → XP_063672700.1  elongation factor 1-delta isoform X5

    UniProtKB/TrEMBL
    A0A2J8LFW5

  18. XM_063816635.1 → XP_063672705.1  elongation factor 1-delta isoform X6

    UniProtKB/TrEMBL
    A0A2J8LFW5

  19. XM_016959990.4 → XP_016815479.4  elongation factor 1-delta isoform X5

    UniProtKB/TrEMBL
    A0A2J8LFW5

  20. XM_063816639.1 → XP_063672709.1  elongation factor 1-delta isoform X6

    UniProtKB/TrEMBL
    A0A2J8LFW5

  21. XM_063816641.1 → XP_063672711.1  elongation factor 1-delta isoform X7

    UniProtKB/TrEMBL
    A0A2J8LFW5

  22. XM_063816648.1 → XP_063672718.1  elongation factor 1-delta isoform X10

    UniProtKB/TrEMBL
    A0A2I3TRF3, A0A2J8LFV0, A0A2J8LFW1, A0A6D2XNZ3

  23. XM_054657557.2 → XP_054513532.2  elongation factor 1-delta isoform X8

    UniProtKB/TrEMBL
    A0A2J8LFW5

  24. XM_063816637.1 → XP_063672707.1  elongation factor 1-delta isoform X6

    UniProtKB/TrEMBL
    A0A2J8LFW5

  25. XM_063816634.1 → XP_063672704.1  elongation factor 1-delta isoform X5

    UniProtKB/TrEMBL
    A0A2J8LFW5

  26. XM_054657556.2 → XP_054513531.2  elongation factor 1-delta isoform X5

    UniProtKB/TrEMBL
    A0A2J8LFW5

  27. XM_063816632.1 → XP_063672702.1  elongation factor 1-delta isoform X5

    UniProtKB/TrEMBL
    A0A2J8LFW5

  28. XM_063816631.1 → XP_063672701.1  elongation factor 1-delta isoform X5

    UniProtKB/TrEMBL
    A0A2J8LFW5

  29. XM_063816643.1 → XP_063672713.1  elongation factor 1-delta isoform X7

    UniProtKB/TrEMBL
    A0A2J8LFW5

  30. XM_063816629.1 → XP_063672699.1  elongation factor 1-delta isoform X4

    UniProtKB/TrEMBL
    A0A2J8LFW5

  31. XM_016959987.4 → XP_016815476.4  elongation factor 1-delta isoform X3

    UniProtKB/TrEMBL
    A0A2J8LFW5

  32. XM_016959986.4 → XP_016815475.4  elongation factor 1-delta isoform X2

    UniProtKB/TrEMBL
    A0A2J8LFW5

  33. XM_016959985.4 → XP_016815474.4  elongation factor 1-delta isoform X1

    UniProtKB/TrEMBL
    A0A2J8LFW5

  34. XM_063816633.1 → XP_063672703.1  elongation factor 1-delta isoform X5

    UniProtKB/TrEMBL
    A0A2J8LFW5

  35. XM_054657559.2 → XP_054513534.1  elongation factor 1-delta isoform X9

    UniProtKB/TrEMBL
    A0A2I3TAZ4, A0A2J8LFV2, A0A6D2XDC3, G2HFT3
Nucleotide Protein
Heading Accession and Version

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