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MAPK13 mitogen-activated protein kinase 13 [ Pan troglodytes (chimpanzee) ]

Gene ID: 462644, updated on 13-Apr-2024

Summary

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Official Symbol
MAPK13provided by VGNC
Official Full Name
mitogen-activated protein kinase 13provided by VGNC
Primary source
VGNC:VGNC:7195
Locus tag
CK820_G0007080
See related
Ensembl:ENSPTRG00000018098
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
SAPK4
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
13
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 5 NC_072403.2 (42000226..42010004)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 6 NC_072404.1 (42000232..42019316)

Chromosome 5 - NC_072403.2Genomic Context describing neighboring genes Neighboring gene solute carrier family 26 member 8 Neighboring gene mitogen-activated protein kinase 14 Neighboring gene ADP-sugar pyrophosphatase-like Neighboring gene basic proline-rich protein-like Neighboring gene bromodomain and PHD finger containing 3 Neighboring gene patatin like phospholipase domain containing 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structure and polymorphism of two stress-activated protein kinase genes centromeric of the MHC: SAPK2a and SAPK4. Herbison CE, et al. DNA Seq, 1999. PMID 10727080

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables MAP kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in MAPK cascade IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitogen-activated protein kinase 13
Names
MAP kinase 13
MAPK 13
stress-activated protein kinase 4
NP_001029261.2
XP_016810149.1
XP_016810150.1
XP_063667998.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001034089.2 → NP_001029261.2  mitogen-activated protein kinase 13

    See identical proteins and their annotated locations for NP_001029261.2

    Status: VALIDATED

    Source sequence(s)
    AF100547, JAQQLN020000005
    UniProtKB/Swiss-Prot
    Q9N272
    UniProtKB/TrEMBL
    A0A2J8NZ50, A0A6D2W9Q9, H2QSW2, K7AUK7
    Related
    ENSPTRP00000030916.3, ENSPTRT00000033459.3
    Conserved Domains (1) summary
    cd07879
    Location:9 → 351
    STKc_p38delta; Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase (also called MAPK13)

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072403.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    42000226..42010004
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063811928.1 → XP_063667998.1  mitogen-activated protein kinase 13 isoform X3

  2. XM_016954661.3 → XP_016810150.1  mitogen-activated protein kinase 13 isoform X2

    UniProtKB/TrEMBL
    A0A2J8NZ49
    Conserved Domains (2) summary
    smart00220
    Location:30 → 284
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cl21453
    Location:9 → 327
    PKc_like; Protein Kinases, catalytic domain

  3. XM_016954660.3 → XP_016810149.1  mitogen-activated protein kinase 13 isoform X1

    UniProtKB/Swiss-Prot
    Q9N272
    Conserved Domains (1) summary
    cl21453
    Location:9 → 341
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q9N272.1 GenPept UniProtKB/Swiss-Prot:Q9N272

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