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TKTL2 transketolase like 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 461583, updated on 17-Aug-2024

Summary

Official Symbol
TKTL2provided by VGNC
Official Full Name
transketolase like 2provided by VGNC
Primary source
VGNC:VGNC:12855
Locus tag
CK820_G0017939
See related
Ensembl:ENSPTRG00000016563
Gene type
protein coding
RefSeq status
INFERRED
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
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Genomic context

Location:
chromosome: 3
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 3 NC_072401.2 (165189143..165191800, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 4 NC_072402.1 (165148552..165151209, complement)

Chromosome 3 - NC_072401.2Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein eL33-like Neighboring gene neuropeptide Y receptor Y1 Neighboring gene neuropeptide Y receptor Y5 Neighboring gene uncharacterized LOC134809928 Neighboring gene translation machinery associated 16 homolog Neighboring gene membrane associated ring-CH-type finger 1

Genomic regions, transcripts, and products

General protein information

Preferred Names
transketolase-like protein 2
NP_001230054.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001243125.2NP_001230054.1  transketolase-like protein 2

    See identical proteins and their annotated locations for NP_001230054.1

    Status: INFERRED

    Source sequence(s)
    DC529362, DC529632, JAQQLN020000003
    UniProtKB/TrEMBL
    A0A2J8MQG3
    Related
    ENSPTRP00000028429.3, ENSPTRT00000030786.3
    Conserved Domains (4) summary
    cd07033
    Location:322476
    TPP_PYR_DXS_TK_like; Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK), and related proteins
    PRK05899
    Location:8619
    PRK05899; transketolase; Reviewed
    cd02012
    Location:20268
    TPP_TK; Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes the transfer of a two-carbon unit from ketose phosphates to aldose phosphates. In heterotrophic organisms, TK provides a link between glycolysis and the ...
    pfam02780
    Location:493615
    Transketolase_C; Transketolase, C-terminal domain

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072401.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    165189143..165191800 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)