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SLC9B2 solute carrier family 9 member B2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 461411, updated on 17-Aug-2024

Summary

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Official Symbol
SLC9B2provided by VGNC
Official Full Name
solute carrier family 9 member B2provided by VGNC
Primary source
VGNC:VGNC:7718
See related
Ensembl:ENSPTRG00000016328
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
NHEDC2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 3 NC_072401.2 (104480620..104537645, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 4 NC_072402.1 (104479594..104537616, complement)

Chromosome 3 - NC_072401.2Genomic Context describing neighboring genes Neighboring gene ubiquitin conjugating enzyme E2 D3 Neighboring gene CDGSH iron sulfur domain 2 Neighboring gene solute carrier family 9 member B1 Neighboring gene actin-related protein 3B-like Neighboring gene 3-hydroxybutyrate dehydrogenase 2 Neighboring gene centromere protein E

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Major chimpanzee-specific structural changes in sperm development-associated genes. Kim RN, et al. Funct Integr Genomics, 2011 Sep. PMID 21484476

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables antiporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sodium/hydrogen exchanger 9B2
Names
Na+/H+ exchanger domain containing 2
solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001246497.1 → NP_001233426.1  sodium/hydrogen exchanger 9B2

    See identical proteins and their annotated locations for NP_001233426.1

    Status: PROVISIONAL

    Source sequence(s)
    AK306842
    UniProtKB/TrEMBL
    G2HJC8, H2R2T9
    Related
    ENSPTRP00000075758.1, ENSPTRT00000102284.1
    Conserved Domains (1) summary
    cl01133
    Location:176 → 537
    Na_H_Exchanger; Sodium/hydrogen exchanger family

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072401.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    104480620..104537645 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054682653.2 → XP_054538628.1  sodium/hydrogen exchanger 9B2 isoform X2

    UniProtKB/TrEMBL
    H2R2T9

  2. XM_054682652.2 → XP_054538627.1  sodium/hydrogen exchanger 9B2 isoform X2

    UniProtKB/TrEMBL
    H2R2T9

  3. XM_009447918.5 → XP_009446193.1  sodium/hydrogen exchanger 9B2 isoform X1

    See identical proteins and their annotated locations for XP_009446193.1

    UniProtKB/TrEMBL
    G2HJC8, H2R2T9
    Conserved Domains (1) summary
    cl01133
    Location:176 → 537
    Na_H_Exchanger; Sodium/hydrogen exchanger family

  4. XM_054682654.2 → XP_054538629.1  sodium/hydrogen exchanger 9B2 isoform X3

    UniProtKB/TrEMBL
    A0A2I3RLF5

  5. XM_009447920.5 → XP_009446195.1  sodium/hydrogen exchanger 9B2 isoform X3

    See identical proteins and their annotated locations for XP_009446195.1

    UniProtKB/TrEMBL
    A0A2I3RLF5
    Related
    ENSPTRP00000065478.1
    Conserved Domains (1) summary
    cl01133
    Location:176 → 413
    Na_H_Exchanger; Sodium/hydrogen exchanger family

  6. XM_054682651.2 → XP_054538626.1  sodium/hydrogen exchanger 9B2 isoform X1

    UniProtKB/TrEMBL
    G2HJC8, H2R2T9

RNA

  1. XR_010156105.1 RNA Sequence

  2. XR_008547395.2 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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