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AZI2 5-azacytidine induced 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 460239, updated on 17-Aug-2024

Summary

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Official Symbol
AZI2provided by VGNC
Official Full Name
5-azacytidine induced 2provided by VGNC
Primary source
VGNC:VGNC:5034
Locus tag
CK820_G0008957
See related
Ensembl:ENSPTRG00000014707
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (32306420..32331911, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (32306091..32331273, complement)

Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129143605 Neighboring gene uncharacterized LOC107970593 Neighboring gene large ribosomal subunit protein eL34-like Neighboring gene C-X9-C motif containing 1 Neighboring gene zinc finger CW-type and PWWP domain containing 2 Neighboring gene uncharacterized LOC134809434 Neighboring gene RNA binding motif single stranded interacting protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
5-azacytidine-induced protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    32306420..32331911 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001166351.8 → XP_001166351.2  5-azacytidine-induced protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8NPQ1, A0A803KHX7, K6ZPU5
    Conserved Domains (2) summary
    pfam12845
    Location:216 → 265
    TBD; TBD domain
    cl25732
    Location:39 → 255
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_001166162.8 → XP_001166162.2  5-azacytidine-induced protein 2 isoform X3

    UniProtKB/TrEMBL
    A0A2J8NPP8, A0A2J8NPQ3

  3. XM_009445067.5 → XP_009443342.2  5-azacytidine-induced protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A2J8NPP8, A0A2J8NPQ2, A0A2J8NPQ5, A0A8I3B0Z7, K7BK51
    Conserved Domains (1) summary
    cl25732
    Location:46 → 233
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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