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HOXD12 homeobox D12 [ Pan troglodytes (chimpanzee) ]

Gene ID: 459760, updated on 17-Aug-2024

Summary

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Official Symbol
HOXD12provided by VGNC
Official Full Name
homeobox D12provided by VGNC
Primary source
VGNC:VGNC:1964
Locus tag
CK820_G0001552
See related
Ensembl:ENSPTRG00000012665
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See HOXD12 in Genome Data Viewer
Location:
chromosome: 13
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 13 NC_072411.2 (78142981..78146877)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 2B NC_072400.1 (78142944..78146840)

Chromosome 13 - NC_072411.2Genomic Context describing neighboring genes Neighboring gene even-skipped homeobox 2 Neighboring gene homeobox D13 Neighboring gene homeobox D11 Neighboring gene homeobox D10 Neighboring gene homeobox D9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sequence-specific double-stranded DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
homeobox protein Hox-D12

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072411.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    78142981..78146877
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_515926.7 → XP_515926.1  homeobox protein Hox-D12

    UniProtKB/TrEMBL
    A0A2J8PR86, A0A6D2WKV4, H2RG81
    Related
    ENSPTRP00000060527.1
    Conserved Domains (1) summary
    pfam00046
    Location:205 → 258
    Homeobox; Homeobox domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials