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ZNF846 zinc finger protein 846 [ Pan troglodytes (chimpanzee) ]

Gene ID: 455687, updated on 3-Apr-2024

Summary

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Gene symbol
ZNF846
Gene description
zinc finger protein 846
Locus tag
CK820_G0026570
See related
Ensembl:ENSPTRG00000029120
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human all
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Genomic context

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See ZNF846 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
15
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 20 NC_072418.2 (12455154..12536090, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 19 NC_072417.1 (12473565..12536133, complement)

Chromosome 20 - NC_072418.2Genomic Context describing neighboring genes Neighboring gene putative zinc finger protein 812 Neighboring gene zinc finger protein 562-like Neighboring gene ubiquitin-conjugating enzyme E2 L3-like Neighboring gene small nucleolar RNA SNORA70 Neighboring gene F-box and leucine rich repeat protein 12 Neighboring gene large ribosomal subunit protein uL16-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger protein 846

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072418.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    12455154..12536090 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054674044.2 → XP_054530019.1  zinc finger protein 846 isoform X3

  2. XM_063801143.1 → XP_063657213.1  zinc finger protein 846 isoform X4

    UniProtKB/TrEMBL
    A0A2I3RRP6, A0A2J8LWQ0, A0A6D2XHQ4

  3. XM_054674042.1 → XP_054530017.1  zinc finger protein 846 isoform X1

  4. XM_063801144.1 → XP_063657214.1  zinc finger protein 846 isoform X5

  5. XM_054674040.2 → XP_054530015.1  zinc finger protein 846 isoform X1

  6. XM_063801140.1 → XP_063657210.1  zinc finger protein 846 isoform X2

  7. XM_054674043.1 → XP_054530018.1  zinc finger protein 846 isoform X1

  8. XM_054674041.2 → XP_054530016.1  zinc finger protein 846 isoform X1

  9. XM_063801142.1 → XP_063657212.1  zinc finger protein 846 isoform X2

  10. XM_009434636.5 → XP_009432911.1  zinc finger protein 846 isoform X1

    See identical proteins and their annotated locations for XP_009432911.1

    Conserved Domains (5) summary
    smart00349
    Location:8 → 54
    KRAB; krueppel associated box
    COG5048
    Location:77 → 467
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:339 → 359
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:8 → 45
    KRAB; KRAB box
    pfam13465
    Location:379 → 404
    zf-H2C2_2; Zinc-finger double domain

  11. XM_024351194.3 → XP_024206962.1  zinc finger protein 846 isoform X2

    Conserved Domains (2) summary
    COG5048
    Location:13 → 367
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:239 → 259
    ZF_C2H2; C2H2 Zn finger [structural motif]

  12. XM_009434637.5 → XP_009432912.1  zinc finger protein 846 isoform X1

    See identical proteins and their annotated locations for XP_009432912.1

    Conserved Domains (5) summary
    smart00349
    Location:8 → 54
    KRAB; krueppel associated box
    COG5048
    Location:77 → 467
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:339 → 359
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam01352
    Location:8 → 45
    KRAB; KRAB box
    pfam13465
    Location:379 → 404
    zf-H2C2_2; Zinc-finger double domain

  13. XM_024351195.3 → XP_024206963.1  zinc finger protein 846 isoform X2

    Conserved Domains (2) summary
    COG5048
    Location:13 → 367
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:239 → 259
    ZF_C2H2; C2H2 Zn finger [structural motif]

  14. XM_063801141.1 → XP_063657211.1  zinc finger protein 846 isoform X2

RNA

  1. XR_010153694.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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