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IRF8 interferon regulatory factor 8 [ Pan troglodytes (chimpanzee) ]

Gene ID: 454294, updated on 6-Jun-2024

Summary

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Official Symbol
IRF8provided by VGNC
Official Full Name
interferon regulatory factor 8provided by VGNC
Primary source
VGNC:VGNC:5813
Locus tag
CK820_G0029452
See related
Ensembl:ENSPTRG00000008435
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See IRF8 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 18 NC_072416.2 (84068911..84093393)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 16 NC_072414.1 (84069435..84093296)

Chromosome 18 - NC_072416.2Genomic Context describing neighboring genes Neighboring gene large ribosomal subunit protein uL1-like Neighboring gene cytochrome c oxidase subunit 4I1 Neighboring gene uncharacterized LOC741428 Neighboring gene uncharacterized LOC741478 Neighboring gene uncharacterized LOC107968921

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in immune system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon regulatory factor 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072416.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    84068911..84093393
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016930314.4 → XP_016785803.1  interferon regulatory factor 8 isoform X1

    UniProtKB/TrEMBL
    A0A2J8LF07, A0A6D2XM83, H2QBN6
    Conserved Domains (2) summary
    pfam00605
    Location:9 → 113
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:203 → 381
    IRF-3; Interferon-regulatory factor 3

  2. XM_063797902.1 → XP_063653972.1  interferon regulatory factor 8 isoform X2

    UniProtKB/TrEMBL
    A0A2J8LEZ4, A0A2J8LF03

  3. XM_016930315.3 → XP_016785804.1  interferon regulatory factor 8 isoform X1

    UniProtKB/TrEMBL
    A0A2J8LF07, A0A6D2XM83, H2QBN6
    Related
    ENSPTRP00000086184.1
    Conserved Domains (2) summary
    pfam00605
    Location:9 → 113
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:203 → 381
    IRF-3; Interferon-regulatory factor 3

  4. XM_016930316.4 → XP_016785805.1  interferon regulatory factor 8 isoform X1

    UniProtKB/TrEMBL
    A0A2J8LF07, A0A6D2XM83, H2QBN6
    Related
    ENSPTRP00000014387.3
    Conserved Domains (2) summary
    pfam00605
    Location:9 → 113
    IRF; Interferon regulatory factor transcription factor
    pfam10401
    Location:203 → 381
    IRF-3; Interferon-regulatory factor 3
Nucleotide Protein
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