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NYNRIN NYN domain and retroviral integrase containing [ Pan troglodytes (chimpanzee) ]

Gene ID: 452822, updated on 17-Aug-2024

Summary

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Official Symbol
NYNRINprovided by VGNC
Official Full Name
NYN domain and retroviral integrase containingprovided by VGNC
Primary source
VGNC:VGNC:3349
Locus tag
CK820_G0029729
See related
Ensembl:ENSPTRG00000006219
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 15
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 15 NC_072413.2 (22694377..22715065)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 14 NC_072412.1 (15918012..15938714)

Chromosome 15 - NC_072413.2Genomic Context describing neighboring genes Neighboring gene U6 spliceosomal RNA Neighboring gene nuclear factor of activated T cells 4 Neighboring gene cerebellin 3 precursor Neighboring gene KH and NYN domain containing Neighboring gene short chain dehydrogenase/reductase family 39U member 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA-DNA hybrid ribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mRNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA integration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic ribonucleoprotein granule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein NYNRIN

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072413.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    22694377..22715065
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016925935.4 → XP_016781424.4  protein NYNRIN

    UniProtKB/TrEMBL
    A0A2J8QKS0, K7CPQ3
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials