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CELF2 CUGBP Elav-like family member 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 450298, updated on 3-Apr-2024

Summary

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Official Symbol
CELF2provided by VGNC
Official Full Name
CUGBP Elav-like family member 2provided by VGNC
Primary source
VGNC:VGNC:10453
Locus tag
CK820_G0034780
See related
Ensembl:ENSPTRG00000002284
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
CUGBP2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 10
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 8 NC_072406.2 (23315901..24182607)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 10 NC_072408.1 (13665073..14531918)

Chromosome 8 - NC_072406.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC104008096 Neighboring gene elongin-C-like Neighboring gene uncharacterized LOC104008099 Neighboring gene uncharacterized LOC134807131 Neighboring gene putative uncharacterized protein CELF2-AS1 Neighboring gene USP6 N-terminal like Neighboring gene uncharacterized LOC104008101 Neighboring gene USP6NL antisense RNA 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables mRNA 3'-UTR binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mRNA splice site recognition IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of alternative mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ribonucleoprotein complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
CUGBP Elav-like family member 2
Names
CUG triplet repeat, RNA binding protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072406.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    23315901..24182607
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009457934.5 → XP_009456209.1  CUGBP Elav-like family member 2 isoform X16

    See identical proteins and their annotated locations for XP_009456209.1

    UniProtKB/TrEMBL
    A0A2J8KYW8
    Conserved Domains (3) summary
    cd12638
    Location:402 → 493
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:15 → 98
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:107 → 187
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  2. XM_054660697.2 → XP_054516672.1  CUGBP Elav-like family member 2 isoform X7

  3. XM_009457918.5 → XP_009456193.1  CUGBP Elav-like family member 2 isoform X4

    See identical proteins and their annotated locations for XP_009456193.1

    UniProtKB/TrEMBL
    A0A2J8KYW8
    Conserved Domains (3) summary
    cd12638
    Location:438 → 529
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  4. XM_009457923.5 → XP_009456198.1  CUGBP Elav-like family member 2 isoform X5

    See identical proteins and their annotated locations for XP_009456198.1

    UniProtKB/TrEMBL
    A0A2I3RFS5, A0A2I3TSD4, A0A2J8KYY1, A0A6D2Y4F4
    Related
    ENSPTRP00000092164.1
    Conserved Domains (4) summary
    TIGR01628
    Location:36 → 378
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12638
    Location:434 → 525
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  5. XM_016919708.4 → XP_016775197.1  CUGBP Elav-like family member 2 isoform X9

    UniProtKB/TrEMBL
    A0A2I3SGW9, A0A2J8KYW5
    Conserved Domains (3) summary
    cd12638
    Location:428 → 519
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:51 → 134
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:143 → 223
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  6. XM_063781358.1 → XP_063637428.1  CUGBP Elav-like family member 2 isoform X16

  7. XM_063781365.1 → XP_063637435.1  CUGBP Elav-like family member 2 isoform X2

    UniProtKB/TrEMBL
    A0A2J8KYY3, K7BI08

  8. XM_016919716.4 → XP_016775205.1  CUGBP Elav-like family member 2 isoform X1

    UniProtKB/TrEMBL
    A0A2I3RFS5, A0A2J8KYW4, A0A6D2XT60, H2R2K8
    Conserved Domains (4) summary
    TIGR01628
    Location:1 → 342
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12638
    Location:398 → 489
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:15 → 98
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:107 → 187
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  9. XM_016919722.4 → XP_016775211.1  CUGBP Elav-like family member 2 isoform X3

    UniProtKB/TrEMBL
    A0A2I3SGW9
    Conserved Domains (3) summary
    cd12638
    Location:392 → 483
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:15 → 98
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:107 → 187
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  10. XM_009457929.5 → XP_009456204.4  CUGBP Elav-like family member 2 isoform X11

  11. XM_016919712.4 → XP_016775201.3  CUGBP Elav-like family member 2 isoform X14

  12. XM_063781357.1 → XP_063637427.1  CUGBP Elav-like family member 2 isoform X13

    UniProtKB/TrEMBL
    A0A2I3TG12

  13. XM_003312453.7 → XP_003312501.4  CUGBP Elav-like family member 2 isoform X13

    UniProtKB/TrEMBL
    A0A2I3TG12

  14. XM_016919713.4 → XP_016775202.3  CUGBP Elav-like family member 2 isoform X15

  15. XM_063781376.1 → XP_063637446.1  CUGBP Elav-like family member 2 isoform X19

  16. XM_063781352.1 → XP_063637422.1  CUGBP Elav-like family member 2 isoform X2

    UniProtKB/TrEMBL
    A0A2J8KYY3, K7BI08

  17. XM_063781354.1 → XP_063637424.1  CUGBP Elav-like family member 2 isoform X3

  18. XM_507653.9 → XP_507653.3  CUGBP Elav-like family member 2 isoform X8

    See identical proteins and their annotated locations for XP_507653.3

    UniProtKB/TrEMBL
    A0A2I3RFS5, A0A2I3SL45, A0A2J8KYV9, A0A6D2XPF9
    Related
    ENSPTRP00000077690.1
    Conserved Domains (4) summary
    TIGR01628
    Location:31 → 373
    PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    cd12638
    Location:429 → 520
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:46 → 129
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:138 → 218
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  19. XM_024346731.3 → XP_024202499.1  CUGBP Elav-like family member 2 isoform X10

    UniProtKB/TrEMBL
    A0A2I3TA86, A0A2J8KYW6, A0A6D2X6J4, K7APM7
    Conserved Domains (3) summary
    cd12631
    Location:46 → 129
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:138 → 218
    RRM2_CELF1_2; RNA recognition motif 2 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12638
    Location:427 → 518
    RRM3_CELF1_2; RNA recognition motif 3 in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  20. XM_016919710.4 → XP_016775199.1  CUGBP Elav-like family member 2 isoform X12

    UniProtKB/TrEMBL
    A0A2I3SGW9, K7DI10
    Conserved Domains (3) summary
    cd12638
    Location:423 → 514
    RRM3_CELF1_2; RNA recognition motif 3 (RRM3) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins
    cd12631
    Location:46 → 129
    RRM1_CELF1_2_Bruno; RNA recognition motif 1 (RRM1) found in CUGBP Elav-like family member CELF-1, CELF-2, Drosophila melanogaster Bruno protein and similar proteins
    cd12634
    Location:138 → 218
    RRM2_CELF1_2; RNA recognition motif 2 (RRM2) found in CUGBP Elav-like family member CELF-1, CELF-2 and similar proteins

  21. XM_063781374.1 → XP_063637444.1  CUGBP Elav-like family member 2 isoform X19

  22. XM_063781377.1 → XP_063637447.1  CUGBP Elav-like family member 2 isoform X19

  23. XM_063781380.1 → XP_063637450.1  CUGBP Elav-like family member 2 isoform X20

  24. XM_063781381.1 → XP_063637451.1  CUGBP Elav-like family member 2 isoform X20

  25. XM_054660696.2 → XP_054516671.1  CUGBP Elav-like family member 2 isoform X6

  26. XM_063781368.1 → XP_063637438.1  CUGBP Elav-like family member 2 isoform X17

  27. XM_063781369.1 → XP_063637439.1  CUGBP Elav-like family member 2 isoform X17

  28. XM_063781371.1 → XP_063637441.1  CUGBP Elav-like family member 2 isoform X18

  29. XM_063781372.1 → XP_063637442.1  CUGBP Elav-like family member 2 isoform X18

  30. XM_063781363.1 → XP_063637433.1  CUGBP Elav-like family member 2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KYW4, A0A6D2XT60, H2R2K8

  31. XM_063781367.1 → XP_063637437.1  CUGBP Elav-like family member 2 isoform X3

  32. XM_063781375.1 → XP_063637445.1  CUGBP Elav-like family member 2 isoform X19

  33. XM_063781370.1 → XP_063637440.1  CUGBP Elav-like family member 2 isoform X17

  34. XM_063781373.1 → XP_063637443.1  CUGBP Elav-like family member 2 isoform X18

  35. XM_063781359.1 → XP_063637429.1  CUGBP Elav-like family member 2 isoform X16

  36. XM_063781382.1 → XP_063637452.1  CUGBP Elav-like family member 2 isoform X20

  37. XM_063781361.1 → XP_063637431.1  CUGBP Elav-like family member 2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KYW4, A0A6D2XT60, H2R2K8

  38. XM_063781364.1 → XP_063637434.1  CUGBP Elav-like family member 2 isoform X2

    UniProtKB/TrEMBL
    A0A2J8KYY3, K7BI08

  39. XM_063781362.1 → XP_063637432.1  CUGBP Elav-like family member 2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KYW4, A0A6D2XT60, H2R2K8

  40. XM_063781366.1 → XP_063637436.1  CUGBP Elav-like family member 2 isoform X3

  41. XM_063781378.1 → XP_063637448.1  CUGBP Elav-like family member 2 isoform X19

  42. XM_063781379.1 → XP_063637449.1  CUGBP Elav-like family member 2 isoform X19

  43. XM_063781383.1 → XP_063637453.1  CUGBP Elav-like family member 2 isoform X20

  44. XM_063781353.1 → XP_063637423.1  CUGBP Elav-like family member 2 isoform X2

    UniProtKB/TrEMBL
    A0A2J8KYY3, K7BI08

  45. XM_063781351.1 → XP_063637421.1  CUGBP Elav-like family member 2 isoform X1

    UniProtKB/TrEMBL
    A0A2J8KYW4, A0A6D2XT60, H2R2K8

  46. XM_063781355.1 → XP_063637425.1  CUGBP Elav-like family member 2 isoform X3

RNA

  1. XR_010146797.1 RNA Sequence

  2. XR_010146799.1 RNA Sequence

  3. XR_010146798.1 RNA Sequence

  4. XR_010146800.1 RNA Sequence

Nucleotide Protein
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