ttc38 tetratricopeptide repeat domain 38 [Xenopus tropicalis (tropical clawed frog)] - Gene

Summary

Official Symbol: ttc38provided by Xenbase
Official Full Name: tetratricopeptide repeat domain 38provided by Xenbase
Primary source: Xenbase:XB-GENE-5833263
See related: Ensembl:ENSXETG00000012273
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus tropicalis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 3

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
104	current	UCB_Xtro_10.0 (GCF_000004195.4)	3	NC_030679.2 (4760039..4769029)
103	previous assembly	Xenopus_tropicalis_v9.1 (GCF_000004195.3)	Unplaced Scaffold	NW_016683513.1 (78007..86491, complement)

Chromosome 3 - NC_030679.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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General protein information

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Preferred Names: tetratricopeptide repeat protein 38

Names: TPR repeat protein 38; UPF0530 protein

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001004945.1 → NP_001004945.1 tetratricopeptide repeat protein 38

See identical proteins and their annotated locations for NP_001004945.1

Status: PROVISIONAL

Source sequence(s)

BC075433

UniProtKB/Swiss-Prot

Q6DIV2

UniProtKB/TrEMBL

A0A1B8Y383, A0A803K010

Related

ENSXETP00000113625.1, ENSXETT00000120425.1

Conserved Domains (1) summary

cd05804
Location:60 → 422

StaR_like; StaR_like; a well-conserved protein found in bacteria, plants, and animals. A family member from Streptomyces toyocaensis, StaR is part of a gene cluster involved in the biosynthesis of glycopeptide antibiotics (GPAs), specifically A47934. It has been ...