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MYF5 myogenic factor 5 [ Ovis aries (sheep) ]

Gene ID: 443159, updated on 5-Mar-2024

Summary

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Gene symbol
MYF5
Gene description
myogenic factor 5
See related
EnsemblRapid:ENSOARG00020009026
Gene type
protein coding
RefSeq status
MODEL
Organism
Ovis aries
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Caprinae; Ovis
Orthologs
human mouse all
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Genomic context

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See MYF5 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_10 current ARS-UI_Ramb_v3.0 (GCF_016772045.2) 3 NC_056056.1 (116773570..116777751)

Chromosome 3 - NC_056056.1Genomic Context describing neighboring genes Neighboring gene protein tyrosine phosphatase receptor type Q Neighboring gene uncharacterized LOC105614699 Neighboring gene U6 spliceosomal RNA Neighboring gene myogenic factor 6 Neighboring gene lin-7 homolog A, crumbs cell polarity complex component Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene uncharacterized LOC132659517

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_056056.1 Chromosome 3 Reference ARS-UI_Ramb_v3.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in muscle organ development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of myoblast differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
myogenic factor 5
Names
MyoD family
basic helix-loop-helix nuclear protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_016772045.2-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UI_Ramb_v3.0 Primary Assembly

Genomic

  1. NC_056056.1 Reference ARS-UI_Ramb_v3.0 Primary Assembly

    Range
    116773570..116777751
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015094556.4 → XP_014950042.1  myogenic factor 5

    UniProtKB/TrEMBL
    A0A6P3YGU4, W5Q0M6
    Related
    ENSOARP00020011422.1, ENSOART00020013863.2
    Conserved Domains (3) summary
    smart00520
    Location:1 → 88
    BASIC; Basic domain in HLH proteins of MYOD family
    pfam00010
    Location:84 → 135
    HLH; Helix-loop-helix DNA-binding domain
    pfam12232
    Location:143 → 198
    Myf5; Myogenic determination factor 5
Nucleotide Protein Strain
Heading Accession and Version

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Research Materials