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hgh1 HGH1 homolog (S. cerevisiae) [ Danio rerio (zebrafish) ]

Gene ID: 436795, updated on 12-Sep-2024

Summary

Official Symbol
hgh1provided by ZNC
Official Full Name
HGH1 homolog (S. cerevisiae)provided by ZNC
Primary source
ZFIN:ZDB-GENE-040718-228
See related
Ensembl:ENSDARG00000101259 AllianceGenome:ZFIN:ZDB-GENE-040718-228
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Danio rerio
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as
brp16; fam203a; zgc:92803
Summary
Orthologous to human HGH1 (HGH1 homolog). [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
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Genomic context

Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_08 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (2876106..2887183)
105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (2803408..2814483)

Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 3, member Bb Neighboring gene exosome component 7 Neighboring gene BOP1 ribosomal biogenesis factor Neighboring gene scleraxis bHLH transcription factor a Neighboring gene heat shock transcription factor 1

Genomic regions, transcripts, and products

Expression

  • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
  • BioProject: PRJEB1986
  • Analysis date: Fri Dec 8 19:48:10 2017

General protein information

Preferred Names
protein HGH1 homolog
Names
brain protein 16
family with sequence similarity 203, member A
protein FAM203A

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001002522.2NP_001002522.2  protein HGH1 homolog

    Status: VALIDATED

    Source sequence(s)
    FO704785
    UniProtKB/Swiss-Prot
    A8KBP9, Q6DGR4
    Related
    ENSDARP00000154685.1, ENSDART00000189309.1

RefSeqs of Annotated Genomes: GCF_000002035.6-RS_2024_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCz11 Primary Assembly

Genomic

  1. NC_007130.7 Reference GRCz11 Primary Assembly

    Range
    2876106..2887183
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)