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LRRC4C leucine rich repeat containing 4C [ Gallus gallus (chicken) ]

Gene ID: 428862, updated on 17-Aug-2024

Summary

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Official Symbol
LRRC4Cprovided by CGNC
Official Full Name
leucine rich repeat containing 4Cprovided by CGNC
Primary source
CGNC:6012
See related
Ensembl:ENSGALG00010023696
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
14
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (19997182..20491651, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (19957010..20451066, complement)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene C11orf74 homolog Neighboring gene TNF receptor associated factor 6 Neighboring gene recombination activating 1 Neighboring gene recombination activating gene 2 Neighboring gene uncharacterized LOC121110964 Neighboring gene uncharacterized LOC112532543 Neighboring gene uncharacterized LOC121110965

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell-cell adhesion mediator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in modulation of chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic membrane adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in glutamatergic synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic density membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich repeat-containing protein 4C

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    19997182..20491651 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046942083.1 → XP_046798039.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  2. XM_040701395.2 → XP_040557329.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3
    Conserved Domains (5) summary
    smart00082
    Location:300 → 350
    LRRCT; Leucine rich repeat C-terminal domain
    COG4886
    Location:77 → 301
    LRR; Leucine-rich repeat (LRR) protein [Transcription]
    sd00033
    Location:78 → 101
    LRR_RI; leucine-rich repeat [structural motif]
    cd00096
    Location:356 → 359
    Ig; Ig strand A [structural motif]
    cl11960
    Location:353 → 442
    Ig; Immunoglobulin domain

  3. XM_046942065.1 → XP_046798021.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3
    Related
    ENSGALP00010035064.1, ENSGALT00010057775.1

  4. XM_046942072.1 → XP_046798028.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  5. XM_046942080.1 → XP_046798036.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  6. XM_046942082.1 → XP_046798038.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  7. XM_046942073.1 → XP_046798029.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3
    Related
    ENSGALP00010035062.1, ENSGALT00010057768.1

  8. XM_046942079.1 → XP_046798035.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  9. XM_046942078.1 → XP_046798034.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  10. XM_046942069.1 → XP_046798025.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  11. XM_046942074.1 → XP_046798030.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  12. XM_046942070.1 → XP_046798026.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  13. XM_046942075.1 → XP_046798031.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  14. XM_046942076.1 → XP_046798032.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  15. XM_046942066.1 → XP_046798022.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  16. XM_046942068.1 → XP_046798024.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3
    Related
    ENSGALP00010035063.1, ENSGALT00010057771.1

  17. XM_046942067.1 → XP_046798023.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  18. XM_046942071.1 → XP_046798027.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  19. XM_046942081.1 → XP_046798037.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3
    Related
    ENSGALP00010035052.1, ENSGALT00010057748.1

  20. XM_046942087.1 → XP_046798043.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3
    Related
    ENSGALP00010035053.1, ENSGALT00010057750.1

  21. XM_046942086.1 → XP_046798042.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3
    Related
    ENSGALP00010035049.1, ENSGALT00010057742.1

  22. XM_046942085.1 → XP_046798041.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3
    Related
    ENSGALP00010035059.1, ENSGALT00010057762.1

  23. XM_046942084.1 → XP_046798040.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  24. XM_046942077.1 → XP_046798033.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3
    Related
    ENSGALP00010035050.1, ENSGALT00010057745.1

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    19957010..20451066 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046919282.1 → XP_046775238.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  2. XM_046919262.1 → XP_046775218.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  3. XM_046919270.1 → XP_046775226.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  4. XM_046919279.1 → XP_046775235.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  5. XM_046919281.1 → XP_046775237.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  6. XM_046919271.1 → XP_046775227.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  7. XM_046919278.1 → XP_046775234.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  8. XM_046919277.1 → XP_046775233.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  9. XM_046919267.1 → XP_046775223.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  10. XM_046919272.1 → XP_046775228.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  11. XM_046919268.1 → XP_046775224.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  12. XM_046919273.1 → XP_046775229.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  13. XM_046919274.1 → XP_046775230.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  14. XM_046919263.1 → XP_046775219.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  15. XM_046919266.1 → XP_046775222.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  16. XM_046919264.1 → XP_046775220.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  17. XM_046919269.1 → XP_046775225.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  18. XM_046919280.1 → XP_046775236.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  19. XM_046919286.1 → XP_046775242.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  20. XM_046919285.1 → XP_046775241.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  21. XM_046919284.1 → XP_046775240.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  22. XM_046919283.1 → XP_046775239.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3

  23. XM_046919275.1 → XP_046775231.1  leucine-rich repeat-containing protein 4C

    UniProtKB/TrEMBL
    F1NTY3
Nucleotide Protein
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