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RAI1 retinoic acid induced 1 [ Gallus gallus (chicken) ]

Gene ID: 427664, updated on 3-Apr-2024

Summary

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Symbol
RAI1provided by CGNC
Full Name
retinoic acid induced 1provided by CGNC
Primary source
CGNC:3630
See related
Ensembl:ENSGALG00010017528
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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See RAI1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
8
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 14 NC_052545.1 (4852124..4913339)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 14 NC_052586.1 (4846757..4908048)

Chromosome 14 - NC_052545.1Genomic Context describing neighboring genes Neighboring gene ras related dexamethasone induced 1 Neighboring gene phosphatidylethanolamine N-methyltransferase Neighboring gene sterol regulatory element binding transcription factor 1 Neighboring gene microRNA mir-33-2 Neighboring gene microRNA 1682

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in circadian regulation of gene expression IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
retinoic acid-induced protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052545.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4852124..4913339
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046901035.1 → XP_046756991.1  retinoic acid-induced protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z1R8

  2. XM_015294408.4 → XP_015149894.2  retinoic acid-induced protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z1R8, A0A8V0Z8U7
    Related
    ENSGALP00010024856.1, ENSGALT00010042366.1
    Conserved Domains (1) summary
    cl22851
    Location:1677 → 1888
    PHD_SF; PHD finger superfamily

  3. XM_015294410.4 → XP_015149896.2  retinoic acid-induced protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0Z8U7
    Conserved Domains (1) summary
    cl22851
    Location:1677 → 1887
    PHD_SF; PHD finger superfamily

  4. XM_046901036.1 → XP_046756992.1  retinoic acid-induced protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z1R8

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052586.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4846757..4908048
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046927923.1 → XP_046783879.1  retinoic acid-induced protein 1 isoform X1

  2. XM_040683427.2 → XP_040539361.1  retinoic acid-induced protein 1 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Z8U7
    Conserved Domains (1) summary
    cd15700
    Location:1677 → 1889
    ePHD_RAI1; Extended PHD finger (ePHD) found in retinoic acid-induced protein 1 (RAI1)

  3. XM_040683428.2 → XP_040539362.1  retinoic acid-induced protein 1 isoform X2

    UniProtKB/TrEMBL
    A0A8V0Z8U7
    Conserved Domains (1) summary
    cl22851
    Location:1677 → 1888
    PHD_SF; PHD finger superfamily

  4. XM_046927924.1 → XP_046783880.1  retinoic acid-induced protein 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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