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LRPPRC leucine rich pentatricopeptide repeat containing [ Gallus gallus (chicken) ]

Gene ID: 421403, updated on 17-Aug-2024

Summary

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Symbol
LRPPRCprovided by CGNC
Full Name
leucine rich pentatricopeptide repeat containingprovided by CGNC
Primary source
CGNC:7574
See related
Ensembl:ENSGALG00010020375
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
38
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 3 NC_052534.1 (24948112..25034016, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 3 NC_052575.1 (24875143..24961015, complement)

Chromosome 3 - NC_052534.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107052929 Neighboring gene ATP binding cassette subfamily G member 5 Neighboring gene ATP binding cassette subfamily G member 8 Neighboring gene circumsporozoite protein-like Neighboring gene uncharacterized LOC121110335 Neighboring gene protein phosphatase, Mg2+/Mn2+ dependent 1B Neighboring gene prolyl endopeptidase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leucine-rich PPR motif-containing protein, mitochondrial
Names
leucine-rich PPR-motif containing

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052534.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    24948112..25034016 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001234902.7 → XP_001234903.4  leucine-rich PPR motif-containing protein, mitochondrial

    UniProtKB/TrEMBL
    A0A8V0Z784, A0A8V0ZE27
    Related
    ENSGALP00010029107.1, ENSGALT00010049236.1
    Conserved Domains (3) summary
    PLN03077
    Location:129 → 241
    PLN03077; Protein ECB2; Provisional
    PLN03218
    Location:654 → 832
    PLN03218; maturation of RBCL 1; Provisional
    sd00004
    Location:182 → 209
    PPR; PPR repeat [structural motif]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052575.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    24875143..24961015 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040667708.2 → XP_040523642.1  leucine-rich PPR motif-containing protein, mitochondrial

    UniProtKB/TrEMBL
    A0A8V0ZE27
    Conserved Domains (3) summary
    PLN03218
    Location:168 → 282
    PLN03218; maturation of RBCL 1; Provisional
    sd00004
    Location:182 → 209
    PPR; PPR repeat [structural motif]
    pfam13812
    Location:132 → 193
    PPR_3; Pentatricopeptide repeat domain

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001039286.1: Suppressed sequence

    Description
    NM_001039286.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.
Nucleotide Protein Strain
Heading Accession and Version

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