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MED30 mediator complex subunit 30 [ Gallus gallus (chicken) ]

Gene ID: 420284, updated on 5-Mar-2024

Summary

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Symbol
MED30provided by CGNC
Full Name
mediator complex subunit 30provided by CGNC
Primary source
CGNC:66373
See related
Ensembl:ENSGALG00010009083
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
THRAP6
Orthologs
human mouse all
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Genomic context

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See MED30 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
7
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (134774547..134796945)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (134983040..135005685)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 30 member 8 Neighboring gene uncharacterized LOC121109902 Neighboring gene exostosin glycosyltransferase 1 Neighboring gene microRNA 1467 Neighboring gene uncharacterized LOC121109904

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 30
Names
thyroid hormone receptor associated protein 6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001277436.2 → NP_001264365.1  mediator of RNA polymerase II transcription subunit 30

    See identical proteins and their annotated locations for NP_001264365.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) represents the longer transcript. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    JAENSK010000044
    UniProtKB/TrEMBL
    A0A1D5NUC6
    Conserved Domains (1) summary
    pfam11315
    Location:28 → 177
    Med30; Mediator complex subunit 30

  2. NM_001277438.2 → NP_001264367.1  mediator of RNA polymerase II transcription subunit 30

    See identical proteins and their annotated locations for NP_001264367.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) differs in the 5' UTR compared to variant 1. Both variants 1 and 2 encode the same protein.
    Source sequence(s)
    JAENSK010000044
    UniProtKB/TrEMBL
    A0A1D5NUC6
    Related
    ENSGALP00010012325.1, ENSGALT00010021628.1
    Conserved Domains (1) summary
    pfam11315
    Location:28 → 177
    Med30; Mediator complex subunit 30

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    134774547..134796945
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_025147120.3 → XP_025002888.1  mediator of RNA polymerase II transcription subunit 30 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y4B4
    Related
    ENSGALP00010012330.1, ENSGALT00010021633.1
    Conserved Domains (1) summary
    pfam11315
    Location:28 → 164
    Med30; Mediator complex subunit 30

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    134983040..135005685
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046910731.1 → XP_046766687.1  mediator of RNA polymerase II transcription subunit 30 isoform X1

    UniProtKB/TrEMBL
    A0A8V0Y4B4
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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