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SYBU syntabulin [ Gallus gallus (chicken) ]

Gene ID: 420277, updated on 5-Mar-2024

Summary

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Symbol
SYBUprovided by CGNC
Full Name
syntabulinprovided by CGNC
Primary source
CGNC:51220
See related
Ensembl:ENSGALG00010008438
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
GOLSYN
Orthologs
human mouse all
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Genomic context

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See SYBU in Genome Data Viewer
Location:
chromosome: 2
Exon count:
9
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (131582508..131626605, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (131792318..131836406, complement)

Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene estrogen receptor binding site associated, antigen, 9 Neighboring gene ENY2, transcription and export complex 2 subunit Neighboring gene potassium voltage-gated channel modifier subfamily V member 1 Neighboring gene CUB and Sushi multiple domains 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Expression of m-Golsyn/Syntabulin gene during mouse brain development. Funakoshi E, et al. Neurosci Lett, 2006 Aug 7. PMID 16750881

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Functional characterization of the mouse Golsyn/Syntabulin ortholog.
    Title: Expression of m-Golsyn/Syntabulin gene during mouse brain development.
Submit: New GeneRIF Correction

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in axonal transport of mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse maturation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
syntabulin
Names
Golgi-localized syntaphilin-related protein
syntabulin (syntaxin-interacting)
syntaxin-1-binding protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    131582508..131626605 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015283016.4 → XP_015138502.1  syntabulin isoform X3

    Conserved Domains (1) summary
    pfam15290
    Location:209 → 501
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp

  2. XM_015283015.4 → XP_015138501.1  syntabulin isoform X2

    Conserved Domains (1) summary
    pfam15290
    Location:211 → 503
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp

  3. XM_025148137.3 → XP_025003905.1  syntabulin isoform X5

    Conserved Domains (1) summary
    pfam15290
    Location:172 → 436
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp

  4. XM_015283014.4 → XP_015138500.1  syntabulin isoform X1

    UniProtKB/TrEMBL
    A0A1D5NVV7
    Related
    ENSGALP00010011718.1, ENSGALT00010020170.1
    Conserved Domains (1) summary
    pfam15290
    Location:212 → 504
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp

  5. XM_046930534.1 → XP_046786490.1  syntabulin isoform X7

  6. XM_040694683.2 → XP_040550617.1  syntabulin isoform X7

    Conserved Domains (1) summary
    pfam15290
    Location:92 → 384
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp

  7. XM_046930531.1 → XP_046786487.1  syntabulin isoform X7

  8. XM_046930530.1 → XP_046786486.1  syntabulin isoform X7

  9. XM_025148138.2 → XP_025003906.2  syntabulin isoform X4

    Conserved Domains (2) summary
    COG1196
    Location:219 → 320
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    TIGR02168
    Location:242 → 434
    SMC_prok_B; chromosome segregation protein SMC, common bacterial type

  10. XM_040694667.2 → XP_040550601.2  syntabulin isoform X6

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    131792318..131836406 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040664130.2 → XP_040520064.1  syntabulin isoform X3

    Conserved Domains (1) summary
    pfam15290
    Location:209 → 501
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp

  2. XM_040664129.2 → XP_040520063.1  syntabulin isoform X2

    Conserved Domains (1) summary
    pfam15290
    Location:211 → 503
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp

  3. XM_040664131.2 → XP_040520065.1  syntabulin isoform X5

    Conserved Domains (1) summary
    pfam15290
    Location:172 → 436
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp

  4. XM_040664128.2 → XP_040520062.1  syntabulin isoform X1

    UniProtKB/TrEMBL
    A0A1D5NVV7
    Conserved Domains (1) summary
    pfam15290
    Location:212 → 504
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp

  5. XM_046912682.1 → XP_046768638.1  syntabulin isoform X7

  6. XM_040664134.2 → XP_040520068.1  syntabulin isoform X7

    Conserved Domains (1) summary
    pfam15290
    Location:92 → 384
    Syntaphilin; Golgi-localized syntaxin-1-binding clamp

  7. XM_046912681.1 → XP_046768637.1  syntabulin isoform X7

  8. XM_046912680.1 → XP_046768636.1  syntabulin isoform X7

  9. XM_040664132.2 → XP_040520066.2  syntabulin isoform X8

Nucleotide Protein Strain
Heading Accession and Version

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