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SYT10 synaptotagmin 10 [ Gallus gallus (chicken) ]

Gene ID: 418129, updated on 5-Mar-2024

Summary

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Symbol
SYT10provided by CGNC
Full Name
synaptotagmin 10provided by CGNC
Primary source
CGNC:9777
See related
Ensembl:ENSGALG00010011050
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (58685257..58729984)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (59001899..59046630)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 13 member 4 Neighboring gene chromosome 7 open reading frame 73 Neighboring gene uncharacterized LOC112533636 Neighboring gene uncharacterized LOC121109080 Neighboring gene plakophilin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium-dependent phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylserine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables syntaxin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium-ion regulated exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to calcium ion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of calcium ion-dependent exocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of dopamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
synaptotagmin-10
Names
synaptotagmin X

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    58685257..58729984
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004937879.5 → XP_004937936.1  synaptotagmin-10 isoform X2

    Conserved Domains (2) summary
    cd08385
    Location:230 → 355
    C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
    cl14603
    Location:364 → 456
    C2; C2 domain

  2. XM_416361.8 → XP_416361.2  synaptotagmin-10 isoform X1

    UniProtKB/TrEMBL
    E1C2V4
    Related
    ENSGALP00010015065.1, ENSGALT00010026464.1
    Conserved Domains (2) summary
    cd08385
    Location:230 → 355
    C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
    cd08403
    Location:364 → 497
    C2B_Synaptotagmin-3-5-6-9-10; C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    59001899..59046630
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040660281.2 → XP_040516215.1  synaptotagmin-10 isoform X2

    Conserved Domains (2) summary
    cd08385
    Location:230 → 355
    C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
    cl14603
    Location:364 → 456
    C2; C2 domain

  2. XM_040660280.2 → XP_040516214.1  synaptotagmin-10 isoform X1

    UniProtKB/TrEMBL
    E1C2V4
    Conserved Domains (2) summary
    cd08385
    Location:230 → 355
    C2A_Synaptotagmin-1-5-6-9-10; C2A domain first repeat present in Synaptotagmins 1, 5, 6, 9, and 10
    cd08403
    Location:364 → 497
    C2B_Synaptotagmin-3-5-6-9-10; C2 domain second repeat present in Synaptotagmins 3, 5, 6, 9, and 10
Nucleotide Protein
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