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CAPS2 calcyphosine 2 [ Gallus gallus (chicken) ]

Gene ID: 417859, updated on 17-Aug-2024

Summary

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Symbol
CAPS2provided by CGNC
Full Name
calcyphosine 2provided by CGNC
Primary source
CGNC:7764
See related
Ensembl:ENSGALG00010012891
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
22
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (37828463..37863978, complement)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (38174150..38208125, complement)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101748307 Neighboring gene potassium voltage-gated channel subfamily C member 2 Neighboring gene GLI pathogenesis related 1 like 1 Neighboring gene coiled-coil domain containing 107 Neighboring gene GLI pathogenesis related 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
calcyphosin-2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    37828463..37863978 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015283083.4 → XP_015138569.2  calcyphosin-2 isoform X1

    UniProtKB/TrEMBL
    A0A8V0YHG2
    Conserved Domains (2) summary
    PTZ00183
    Location:512 → 668
    PTZ00183; centrin; Provisional
    cd00051
    Location:512 → 569
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  2. XM_416102.8 → XP_416102.5  calcyphosin-2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YGE3, A0A8V0YJG0
    Related
    ENSGALP00010017974.1, ENSGALT00010030939.1
    Conserved Domains (1) summary
    cd00051
    Location:433 → 490
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  3. XM_015283096.3 → XP_015138582.2  calcyphosin-2 isoform X5

    UniProtKB/TrEMBL
    A0A8V0YHG2
    Conserved Domains (1) summary
    cd00051
    Location:306 → 363
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  4. XM_015283112.4 → XP_015138598.2  calcyphosin-2 isoform X6

    Conserved Domains (1) summary
    cd00051
    Location:243 → 300
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  5. XM_040651118.2 → XP_040507052.1  calcyphosin-2 isoform X3

  6. XM_040651123.2 → XP_040507057.1  calcyphosin-2 isoform X4

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    38174150..38208125 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040659308.2 → XP_040515242.1  calcyphosin-2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YGE3
    Conserved Domains (1) summary
    cd00051
    Location:433 → 490
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...

  2. XM_046909771.1 → XP_046765727.1  calcyphosin-2 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YGE3

  3. XM_040659310.1 → XP_040515244.1  calcyphosin-2 isoform X5

    UniProtKB/TrEMBL
    A0A8V0YHG2
    Conserved Domains (1) summary
    cd00051
    Location:306 → 363
    EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
Nucleotide Protein
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